Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KSVEHIFEGEINRKGKAVGYHSEAIPESPGKIIVGTKTKPNREGAYEAEIEVAGVPKKTNGGKSTFFPEDWNAQKIIDEINFAFSNKSHVESNIYVGVASNGMKIQMYLDKEGKIISAFPI |
1 | 5hkqA | 0.16 | 0.16 | 5.21 | 1.32 | SPARKS-K | | NQPEHLAQLGYSQKKGISGAHNADVVDNGVK--IISETPTGVRGITQVQYEIPTKDAAGNTTEKTIYPKIFTDEK-LQLGQEAAAIGYIKNGLQAYDAKAGGVTFRVYIDQKGIVSNFHPK |
2 | 5hkqA | 0.15 | 0.15 | 4.98 | 1.19 | FFAS-3D | | ---EHLAQLDYSQKKGISGAHNADVFNVDNGVKIISETPTGVRGITQVQYEIPTKGNGAKPFEKTIYPKIFTDEKLQLGQEAAAIGYSNKNGLQAYDAKAGGVTFRVYIQKTGIVSNFHP- |
3 | 5hkqA | 0.19 | 0.19 | 6.11 | 1.52 | MUSTER | | NQPEHLAQLDGYSQKKISGAHNAAVVDNGVKII--SETPTGVRGITQVQYEIPTKDAAGNGAKPIYDPKIFTDEK-LQLGQEAAAIGYSNNGLQAYDAKAGGVTFRVYIDQKGIVSNFHPK |
4 | 5hkqA | 0.14 | 0.13 | 4.53 | 1.16 | CNFpred | | --PEHLAQLDGYSQKGISGAHNADVF--NGVKIISETPTGV-RGITQVQYEIPTKTGNYKPFEKTIYDKIFTDEKMLQLGQEAAAIGYIKNGLQAYDAKAGGVTFRVYIDQTGIVSNFHPK |
5 | 5hkqA | 0.18 | 0.17 | 5.66 | 2.05 | HHsearch-2 | | NQPEHLAQLDGYSKKGISGAHNADVFNKGVKIIS--ETPTGVRGITQVQYEIPTKYKAKPFEKTIYDPKIFTDEK-LQLGQEAAAIGYSNNGLQAYDAKAGGVTFRVYIDQTGIVSNFHPK |
6 | 5hkqA | 0.16 | 0.16 | 5.23 | 1.94 | Neff-PPAS | | NQPEHLAQLDGYQKKGISGAHNADVFNKDNGVKIISETPTGVRGITQVQYEIPTKDAAGNFEKTIYDPKIFTDEK-LQLGQEAAAIGYSNNGLQAYDAKAGGVTFRVYIDKTGIVSNFHPK |
7 | 5hkqA | 0.18 | 0.17 | 5.65 | 2.34 | HHsearch | | NQPEHLAQLDGYSKKGISGAHNADVFNKGVKIIS--ETPTGVRGITQVQYEIPTKYKAKPFEKTIYDPKIFTDEK-LQLGQEAAAIGYSNNGLQAYDAKAGGVTFRVYIDQTGIVSNFHP- |
8 | 2c1wB | 0.15 | 0.14 | 4.71 | 1.21 | HHsearch-2 | | CGFEHVFVGESKRGQEMMGLHNWVQFYKRKNIKGYVARPDEDDQVLNLQFNWKEMVKP----VGSSFIGV-SPEFEFALYTIVFLAS---QEKMSVVR-LEELQIVVNRH-GRYIGTAYPV |
9 | 2h85A2 | 0.13 | 0.12 | 4.28 | 1.01 | Neff-PPAS | | --FEHIVYGDFS-HGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCGCSVI-----DLLLGDFVEIIKSQDLSVISKVVKVTIDYAEISFMLWCKDGHVETFYPK |
10 | 4rs4A2 | 0.14 | 0.12 | 4.25 | 1.08 | HHsearch-2 | | FNFEHVVYGDVS-KTTLGGLHLSISQVRMGILAEEFVAA-SDITLKCCTVTYNDPSSKT---VCTYMDLL-L-----DDFVSVLKSLDLTVSKVHEV-IIDNKPWRWMLWKDNAVATFYPQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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