>PF14391 (313 residues) TDSSYIEPQHYNYTVMLQNTNTYEEYTLSSKEGQRISFAPDPTFRLGPYLGWRWVFLGYT VDLKHINASSQHTNKKEFDLSLYSSMLGIDLFWRQTGNDYHVQRMNLSSELDTSPMHKVP FDGFKSSIKGFNLYYIFNHRKFSYPAAYSQSTCQKKSAGSMLLGIGYMRHTIDVDWDKLS SIVDEKLGKKEDGKSRIDSTLTFSKVKYSDISVSCGYAYNWVFAKNFLFNASLSVGLAYN KSKSDTEHSRLDIHDFSFNNFNLDGIGRFGIVWNNTKWYAGASAVIHTYNYKKEQFSTNS SFGSLNIYVGVNF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TDSSYIEPQHYNYTVMLQNTNTYEEYTLSSKEGQRISFAPDPTFRLGPYLGWRWVFLGYTVDLKHINASSQHTNKKEFDLSLYSSMLGIDLFWRQTGNDYHVQRMNLSSELDTSPMHKVPFDGFKSSIKGFNLYYIFNHRKFSYPAAYSQSTCQKKSAGSMLLGIGYMRHTIDVDWDKLSSIVDEKLGKKEDGKSRIDSTLTFSKVKYSDISVSCGYAYNWVFAKNFLFNASLSVGLAYNKSKSDTEHSRLDIHDFSFNNFNLDGIGRFGIVWNNTKWYAGASAVIHTYNYKKEQFSTNSSFGSLNIYVGVNF | |||||||||||||||||||
1 | 6e4vA | 0.09 | 0.09 | 3.24 | 1.03 | MUSTER | MVRKHATSREFKGDVSAEYGKERYVADLQSTEDGKIRAR-NDSWLDRYNSEKTFFSGIVDADL---------GDLTTLSAGYE--YQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQQADTWQATLNATHSE-------VEFDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTG----WNSGKRKVDALDLFADGSYELFG---RQHNLMFGGSYSKQNNRYFNGNFPQTDWSPQSLAQDDTTHMKSLY-ADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDI | |||||||||||||
2 | 1rmgA | 0.08 | 0.06 | 2.30 | 1.79 | CNFpred | ------------SATAIQLD---GIIYRTGTASGNMIAVT---DTTDFELFSSTSKGAVQGFGYVYHAE-GTYGARILRLTDVTHFSVHDIILVDAPFHFTMDT---------------------CSDGEVYNMAIRGG-----NEGG--------LDGIDVWGSNIWVHDVEVTN-----------------DECVTVKSPANNILVESIYCNWSGGCAMGSLGDTDVTDIVYRNVYTWSSNQM-----YMIKSNGGSGTVSNVLLENFIGHGN---AYSLDIDGYWSSMT-DGVQLNNIT-VKNWKGTEAN | |||||||||||||
3 | 4n75A | 0.10 | 0.10 | 3.56 | 1.25 | Neff-PPAS | AELSVTNPYFTVDGVSLGGRLFYNDFQADDADDVTLGFPINEYNSLRAGLGYVHNSLSNMQPYLYSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTVRTSFFWDMGTVWDT-NWDSSQYSGYPDYSDPSN--IRMSAGIALQWMSPLGPLVFSYAQPFKKYD------GDKAEQFQFNIGKTW | |||||||||||||
4 | 1k24a | 0.13 | 0.10 | 3.34 | 1.13 | PROSPECTOR2 | QTA-------NEFTVHTDLS--------------SISSTRAFLKEKHKAAKHIGVRADIPFD----------------------ANQGIRLEAGFGRSKKNIINLETDENKLGKTKNVKLPTGVPENRIDLYTGYTY--------------TQTLSDSLNFRVGAGLGFESSKDS---------------------IKTTKHTLHSSRQSWLAKVHADLLSQLGNGWYINPWSEVKFDLNSRYKLNTGVTNLKKDINQKTNGWGFGLGANIGKKGESASIEAGPFYKQRTYKEGEFSVTTKSGDVSLRVGIKF | |||||||||||||
5 | 1i78A | 0.08 | 0.07 | 2.85 | 0.99 | SPARKS-K | -STETLSFTPDNADISLGTLSGKTKERVYLAEESQLDWKFNNAAIIKGAINWDL----------------MPQISIGAAGWTTLG---------SRGGNMVDQDWMDSSNPGTW--------TDEARHPDTQLNYANEFDLNIKGWLLNEPNY----RLGLMAGYQESRYSFTARGGSYIYS---SEEGFRDDIGSFPNGERAIGYKQRFKMPYIGLTGSYRYED-FELGGTFKYSGWVESSDNDEHYDPKGRITYRSVKDQNYYSVAVNAGYYVPNAKVYVEGAWNRVTNKKGNTSLYDHNNGAGIENYNFI | |||||||||||||
6 | 1i78A | 0.08 | 0.07 | 2.67 | 0.91 | FFAS-3D | TETLSFTPDNINADISLGTLSGKTKERVYLAEEGGRKVS---------QLDWKFNNAAI----------------IKGAINWLMPQISIGAAGWTSRGGNMVDQDWMDSSNPGTWTDEARHPDTQLNEFDLNIKGLLNEPNYRL---------------GLMAGYQESRYSFTARGGS---YIYSSEEGFRDDIGSFPNGERAIGYKQRFKMPYIGLTGSYRY-EDFELGGTFKYSVESSDNDEHYDPKGRITYRSKVKD-QNYYSVAVNAGYYTPNAKVYVEGAWNRVTNKKNGAGIENYNFITTAGLKYTF | |||||||||||||
7 | 1i78A | 0.09 | 0.08 | 2.88 | 0.28 | HHpred | --TETLSFTPDNINADISLGTLS------GK-TKERVYLAEEGGRKVSQLDWKFNN----------------AAIIKGAINWDMPQISIGAAGWTTGG--NMVDQ------DWMDSSPGTHPDTQANEFDLNIKGWLL-----------NE---PNYRLGLMAGYQESRYSFTARGGSYSSEFRDDIG-------SFPNGERAIGYKQRFKMPYIGLTGSYRY-EDFELGGTFKYSGWVESSDNDEDGRI---TYRSKVKDQNYYSVAVNAGYYVPNAKVYVEGAWNRVTNKKNNAGIENYNFITTAGLKYTF | |||||||||||||
8 | 4zgvA | 0.08 | 0.08 | 3.01 | 1.02 | MUSTER | ISAKYVKLDKSSGKISYRTTRDSWTKYHISEVGTNLYYQPKFKKKAGFIFAYNRQQSDIPYYHEYLQQWDQERINETYLLKGT-DIIRMTGMYSPHESKFYKKDVKNGGFTNS----------GGGYRFNMEWEHNASWGKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVIDWS------SSGGANGQNSNIGGYGSFATNTSSFSLKQDYELNPVSWYG--INHQIDFGWETDFYTSRYRRFSDVYTGGVLVVPTGASAGSVVCQSGDELCIPGEQYSRTRILYPERNVQVSNVNYAAYLQNSMSY | |||||||||||||
9 | 3qlbA | 0.09 | 0.07 | 2.66 | 1.72 | CNFpred | ----------WSLNSSARYGHVNLLTNTASG-LRTLNRAAY---RFRIVGDTYSLDNNAQARWN--------LGSTQMVSLLGIDYRRTREDYYLRGGASPIDIYNP-GVFDPSTPFTNTVQRADQVGVYAQQQFTFDE------------------HWVLTVGGRQDRSSARTDNRMN---------------------DSGSKQDDEKFTYRTGLVYLAD--NGLAPYISYSTSFDPVLGTNFYGTPY---------KPTSAKQSEVGVKYQPIDSYITLSLFDLTQENVLKIQTGEINVRGIELEGKASL | |||||||||||||
10 | 2x27X | 0.12 | 0.07 | 2.58 | 0.69 | HHsearch-2 | ----------------------------------DIQGHKAGDFIIRGGFATVDPDDSSSDIQRGTKATVDSDTQLGLTFTYMADKWGVELVAATFNHQVDVK-G-L---------LDGKLADIKQLPPTLLLQYYPMG---------------GTSAFQPYGGLGVNYTTFFDEDLASNRK-AQ-------------G--FSSMKLQDSWGLAGELGFDYMLNEHALFNM---------------------------------------------------AVWYMDIDTKATKVDVDVDPWVYMIGFGYKF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |