Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | RERKLALLEDVDKLKKKLRQEENVHRALERAFSRRLGTLPHLPPYLPPQTLELLAEVAVLEEEVVRLEEEIVSFKQGLYQE |
1 | 2ke4A | 0.19 | 0.19 | 6.00 | 1.09 | Neff-PPAS | | EQQRKRLQQQLEERSRELQKEVDQREALKKMKDVEKTPQMGDPASLEPQIAETLSNIERLKLEVQKYEAWLAEAESRVLSN |
2 | 3qneA1 | 0.12 | 0.11 | 3.95 | 1.19 | SP3 | | VDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLI-AEKEKLSNEKKEIIEKEAEADKNLRSKINQV--- |
3 | 6egcA | 0.22 | 0.20 | 6.22 | 1.00 | SPARKS-K | | TEIIRELERSLREQEELAKRLKELLRELERLQREGSSD---------EDVRELLREIKELVEEIEKLAREQKYLVEELKRQ |
4 | 3a8pA2 | 0.12 | 0.10 | 3.52 | 0.84 | FFAS-3D | | EDTVRLLKSQTRSLLQKIDMDSKMKKMAELQLSVVSD---------PKNRKAIENQIRQWEQNLEKFHMDLFRMRCYL--- |
5 | 2ke4A | 0.19 | 0.19 | 5.99 | 0.40 | HHpred | | EQQRKRLQQQLEERSRELQKEVDQREALKKMKDVEKTPQMGDPASLEPQIAETLSNIERLKLEVQKYEAWLAEAESRVLS- |
6 | 4rsiB | 0.13 | 0.12 | 4.28 | 0.82 | MUSTER | | PEEVDKIERELSERENNFRVASDTVHEMEEELKKLRDHE----PDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKA |
7 | 1wleA | 0.14 | 0.14 | 4.67 | 0.51 | CNFpred | | LPGIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQFYLR |
8 | 3he5B | 0.32 | 0.19 | 5.58 | 0.51 | HHsearch-2 | | SARNAYLRKKIARLKKDNLQ-------------------------LERDEQNLEKIIANLRDEIARLENEVA--------- |
9 | 6h9xA1 | 0.14 | 0.12 | 4.20 | 1.03 | Neff-PPAS | | -DKLRALEERRKVLQVQTENLQAERNSRSKSIGQAKAR----------DIEPLRLEVNKLGEQLDAAKSELETLLAEIRDI |
10 | 3he5B | 0.32 | 0.19 | 5.58 | 0.66 | HHsearch | | SARNAYLRKKIARLKKDNLQ-------------------------LERDEQNLEKIIANLRDEIARLENEVA--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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