>PF14388 (296 residues) NGFVNTIIRAYNTHQHLVLRPDDVWIAILGQFNFYVNAHAEQLRKQFVAHEGKKRLTVHA VGTRFTVDFGSMARQMSDLIDQNVVDKELKDWILPDFSTTSQNDTVICSVMMMATLKAYF EYTFCLTCGIPSVTLEGTKADWEKLFKKVDKFESFGEEPKAWARLLRPVLKGFVSAFEGK PDTAFWAKICHYEDFGSGSPFISGWITAFCVWSSEGKWLGPPLSGPYTDWRPAVQLDDVR YMTVDETDIPPAFCEVDVLLNDNGEEFNCMMVAGHLATKVLDKERNKVAPLSAWFM |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | NGFVNTIIRAYNTHQHLVLRPDDVWIAILGQFNFYVNAHAEQLRKQFVAHEGKKRLTVHAVGTRFTVDFGSMARQMSDLIDQNVVDKELKDWILPDFSTTSQNDTVICSVMMMATLKAYFEYTFCLTCGIPSVTLEGTKADWEKLFKKVDKFESFGEEPKAWARLLRPVLKGFVSAFEGKPDTAFWAKICHYEDFGSGSPFISGWITAFCVWSSEGKWLGPPLSGPYTDWRPAVQLDDVRYMTVDETDIPPAFCEVDVLLNDNGEEFNCMMVAGHLATKVLDKERNKVAPLSAWFM | |||||||||||||||||||
1 | 5mz61 | 0.10 | 0.09 | 3.41 | 0.64 | SPARKS-K | RDSMSAMILNLRVALKSASFFRVLQTTNTLAYYSSIIEEAEKNAKLMRSSNPIVC---NVCTIYPLHSSFAAEYMMSYAIHSDFSQLSIKHFNDVRPRPNI-IQNEIFGMCVIRWLTKKLDSK------------ESADEDTMEIFNNALKIVRYLQQRTTDMILAVTQLGRQLEFPMERPTFEKVRLAMRNEMNHYGHILYREWRCRLFAYTSRDPWTQIGARNAVQSRLEKCKRGLVTMSGHCVQSMPDEMTLVQIAMADDKTIYLVKLHADIMPLAHYSQAVELMDKFTFLLD | |||||||||||||
2 | 1tuaA | 0.09 | 0.05 | 1.92 | 0.76 | FFAS-3D | ----------------VKVKPERL-GAVIGPRGEVKAEIMRRTGTVITVDTENSMVIVEPEAEGIPPVNLMKAAEVVKAISLGFPPEKAFRLLEEDQDSQNHLKRIKGRIIARRTIEEMTDTYINVG--EYEVAIIGDYERAMAAKQAIEMLAE-GRMHSTVYRHLERIMREIKRRER----LKMWAR------------------------------------------------------------------------------------------------------------ | |||||||||||||
3 | 6b2xA1 | 0.06 | 0.03 | 1.16 | 0.29 | HHpred | --------------RILLGEGRLFYAVSLLEGQGDFKLDPQTYKAKFPQIDQIPLI---G--NT-SISPEKVLT---------L-NPDI--AIFGLSG-----SE------LVKQLE---------KAGVPVVFVDFRNSPLKNTLPSMRLLGKLHRQAENYINFYQDNVDKVTDITNK--------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 2zdsB | 0.11 | 0.09 | 3.33 | 0.61 | MUSTER | LPLEEVCRLARDFGYDLACWGDHFEVDKALA-----PSYVDSRHQLLDKY-GLKCWAISNQAVCDAIIDERHEAILPARIWGDGDAEGVRQRA---------AAEIKDTARAAARL------TVIGFTGSAIWHLVSIERGYQDFADRWNPILDVFDAPSEIAYD-YWTTHRALEAVGHRPA-PSHFVWQDLDPVGF-RDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDV--------FRLRSID-------YQGPVSVEWEDAGDRGAPEALTRFD | |||||||||||||
5 | 5vchA | 0.08 | 0.05 | 1.85 | 0.67 | CNFpred | VPIIEHLPTMLSSSNPFERRSILLAISVLVGSPDYTLSQFDKIIPATVTGLKDSEAVVQ-------LAALKCIVQLSTNLQDEVAHEQYLPLVIDIIDSAKHVVIYKYATLALDGLLEFIAHNDI-------------IKYLDPLMNKLFQMLET-QQSPKLRAAIVSAIGSCAFAAGS--FVPYFKTSVQYL------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2ejbA | 0.08 | 0.04 | 1.45 | 0.33 | HHsearch-2 | IKLLQVLEEL-DFSVDLVISRNAK---------VVLKEEVLGLNRIHESPLGHYRGVYVVPCS--TN----TLSC----IANGINK-NLILVLLVR--EAPYNEIHLENMLK---ITRM-GGVVPASPAFY-----HKPQSIDDMINF--------------------VVGKLLDVLRIEHNL----------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 3ld1A | 0.10 | 0.09 | 3.53 | 0.72 | Neff-PPAS | KDIPEQLCDALFFYTSHNPKDYADAFAVRQKFDRNLQTGLADLEDIFGVSPFARKYRELLKTACQWSLTVETLDARALTLDEIFDPTEILWLQVA-------AKIQVSAMAMRRLVGEVTAKVMDALGSNMSALFQIFKQQIVRIFQAALAIFENVSELPQRIAALKMAFAKCAKSITGTCLASINGAVAKFFEELPNGFMGAKIFTTFAFFREAAVKIVDNIPNAPRGTKGFEVVGNAKGTQVVVRGMRNDLTLLDQKAEIPESEGWSAILGGHLCYVFKSGDRFYAAPLSGNFA | |||||||||||||
8 | 6jdkA2 | 0.13 | 0.03 | 1.18 | 0.43 | HHsearch | --------ILRDERSALEVPPEERCALYEK---------L--WQKGFHYWIG------GFSDILTNEEANTMYDFWRDKTRARIKNPALADKLAPMHPFGVKR--P---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 1uhnA | 0.12 | 0.06 | 2.29 | 0.57 | SP3 | --------------------------------------DPELLARDTVAVIDDGLIEFQLALFKTNKKESLFADRVFDLFDTKLGFEEFARALSVFHPNAPIDDKIHFSFQLYDL----------KQQG--FIE----RQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPS----------LL---------KNMTLQYLKDITTTFPSFVFH----------------------------------------------------------- | |||||||||||||
10 | 1fhla | 0.11 | 0.09 | 3.17 | 0.82 | PROSPECTOR2 | ALTYRSLLLLEDEGYSYKNLNGQTLETILADALDYNLELAKRVKAAHLSDTWADPSDQTTPSGWSTTDLGTLKWQLYNYTLEVCNTFARAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLAT-----TPKIMIHLDDGWSWDQQNYFYETVLATGELLSTDLASLKTSLANLQSTYSIPFSVAFLEKLAAVVEATTD-------GLGVYYWEPAWIGNAGLGSSCA--------------------------------------------DNLMV-----DYTTDEVYESIETLL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |