Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | SFKTEQVEIFDCIDIHKQLAFDHHLLRNHSVKLKPTSVPKWPITYDNKGQKVGPMQLQLKGISCPHGTVIVKRTTIQDLINSQHLKSIGFNIPRHVLSQGSNIDLSGHHFATA |
1 | 5voxN | 0.10 | 0.09 | 3.30 | 1.09 | SPARKS-K | | ------AEKRTLIAVIADEDTTTGLLLAGIGQITPETQEKNFFVYQEGKTTTDKFNHFTEERD----DIAILLINQHIAENRARVDSFTNAFPAILEIPSKDHPYDPEKDSVL |
2 | 6f74A1 | 0.15 | 0.12 | 4.19 | 0.32 | FFAS-3D | | -----KGKLIKTSPIAQ-SCYDGPVNKMWTDQDFQTSDPIGRNYPYNITCAPVDYAAGETPTSCILGSLPVNASTREDITLTLNFAK--------QHNIRLVTSSTGHDL--- |
3 | 6n1cA | 0.12 | 0.09 | 3.14 | 0.23 | HHpred | | NTLSEDGDPVDVLVITPVPLISGAVISDAKILAVPTLSKMY--------------QSMQTYQDIPQH-------LLLSIEH--FFKHYKDLEEGKWV---KVEGWVGPDAA-- |
4 | 1zvoC1 | 0.08 | 0.07 | 2.85 | 0.90 | MUSTER | | QLQESGSESLTCIVSGGPIRRTGYYWPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQF---SLNLRSMSAAD----ARGNPPPYYDIGTGSDDGIDVWGQGTTVHVS |
5 | 3a8kA | 0.03 | 0.02 | 1.02 | 0.52 | CNFpred | | GMLNASGGVIDNLIVYYFT----------------------------------------------EDFFRLVVNSATREKDLSWITQHAEPFGIEITVR------DLSMIAVQ |
6 | 3zxuA | 0.16 | 0.12 | 4.13 | 0.41 | HHsearch-2 | | LFPVKYDPPFYVILKPSVKRLGIWELFKHNL---PKYINIHQ-----------HWQLITKD------TD----TSDSNIMKFADLLKVHEGNYKQYSLHIDNMRGADIIDCTF |
7 | 3iykG | 0.06 | 0.06 | 2.67 | 0.95 | Neff-PPAS | | TRHKSFHTNDQWVQWMMKDSMDAQPLKSRNVAHSLHNCVVKIDSKKADTMSYHVEPIEDASKGCLHTRTMMWNHLVRIETFHAAQEVAYTLKPTYDIVVHAERRDRSQPFRQS |
8 | 4hwmA | 0.13 | 0.09 | 3.05 | 0.57 | HHsearch | | LIVTKEGDTFDCRQ--WQRVIA-----------QPGKL-NRDSEIYNVTASLDIYPVEREGNTIYDR--TLSRVTPECE---KAWAKAR----AT-------GPV-------- |
9 | 5dgfsM | 0.10 | 0.05 | 1.99 | 0.82 | SP3 | | ---------------------------------KEIVKSNTSSKKADVPPPSADPSKARKNRP--------RPSGNEGAIRDKTA---GRRNNRSKDVTDSATTKKS------ |
10 | 5j96C2 | 0.04 | 0.04 | 2.19 | 0.53 | PROSPECTOR2 | | VIYPKDSIVGSWHSFFDSTKLRYGAVSDHIAQLGNIPANVNRKAFWIVVGDTIKFKTLDKINGTEWFIVPYPLTPLEKIAQYTASLLASNTAISQIRPIVDSAASKDNILWSP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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