>PF14351 (314 residues) PWYMRIFAGIGAWFAAFMFLGFLAITNIITNEFGALVVGLGLCAVAIGINRTNQASTFLR QLALAISITGQALVLFGWTIIVESVIVAALGMIVLEIALFVAHRDFSQRLISTLGVITAI HVIAGDLNNWVESFNYMYLLLSVMIISFSLLMWFEAKIHEDQRWSSASPIAYGMLLFMAI SSLLINFNWAEFFSRGSFFILPALVGIICLGTTIWMIINEFEYKLGFIELGCIAFGLLFI AFAGINTPAIIIALLIILLSYWRGYPVMFGFGCLALIGALSLYYYNLNISLLYKSIILFG TGMMLLAIRALVLK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | PWYMRIFAGIGAWFAAFMFLGFLAITNIITNEFGALVVGLGLCAVAIGINRTNQASTFLRQLALAISITGQALVLFGWTIIVESVIVAALGMIVLEIALFVAHRDFSQRLISTLGVITAIHVIAGDLNNWVESFNYMYLLLSVMIISFSLLMWFEAKIHEDQRWSSASPIAYGMLLFMAISSLLINFNWAEFFSRGSFFILPALVGIICLGTTIWMIINEFEYKLGFIELGCIAFGLLFIAFAGINTPAIIIALLIILLSYWRGYPVMFGFGCLALIGALSLYYYNLNISLLYKSIILFGTGMMLLAIRALVLK | |||||||||||||||||||
1 | 5y78A | 0.06 | 0.06 | 2.45 | 1.32 | SPARKS-K | ------------------SPTLVHTLKVGFYFFLWYFFNFIFNIANKRTLNMWKY--PWVLSTIQLGVGALYCTFLWVKKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVFHPL------TYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKNEKTLIAQNTYALITIISFFMELPFALLMEGSAIAGVSK----AKLFGSIMFCSLFYHLYNEVSYLCLDNV-SPVSFSIGNTIKRVIIIFGSILVFTRLNFIGSTIAIIGTMLYSLAKAKLP- | |||||||||||||
2 | 4k1cA | 0.13 | 0.12 | 4.29 | 1.44 | FFAS-3D | -WDLQYIL-KASPLNFLLVFVPLGLIWGHFSHTLTFLFNFLAIIPLAAIL-----ANATEELADKANTIGGLLNATF-------GNAVELIVSIIALKVRIVQASMLGSLLSNLLLVLGLCFIFGGYNRVQQTAAQTMSSLLAIACASLLIPAAFRATLPFIDGKILELSRGTSIVILIVYVLFLYFQLGSHHAHHSLSVKSSLVILLGTTVIISFCADFL---VGTIDNVVTFIGLIVIPIVG-NAAEHVTSVLVLALGVAIGSSLQVALFVTPFMVLVGWMFSTFETATLFIAVFLSNEGVMSLAMYILI-- | |||||||||||||
3 | 6oh2A | 0.09 | 0.09 | 3.26 | 1.10 | MUSTER | ---YCLTVMTLVAAAYTVALRYTRTTALYFSTTAVCITEVIKLLISVGLLAKETGSLGRFKASLSENVLGSPKELAKLSVP---SLVYAVQNNMAFLALSNL-DAAVYQVTYQLKIPCTALCTVLMLNRTLSKLQWISVFMLCGGVTLVQW-----KPAVVVAQNPLLGFGAIAIAVLCSGFAGVYFEKVLKSSDTSLWVRNIQMYLSGIVVTLAGTYLSDGAEIQEKGFFYGYTYYVWFVIFLASVGGLYTSVVVKYTDNIM--KGFSAAAAIVLSTIASVLLFGLQIT----LSFALGALLVCVSIYLYGLP | |||||||||||||
4 | 3rkoB | 0.06 | 0.05 | 2.43 | 1.68 | CNFpred | DGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLAD----NLLLMYLGWEGVGLCSYLLIGFY-AFVVTRVGDVFLAFALFILYNEL-NMLMWATLMLLGGAVGKSAWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLM--THAFFKALLFLASGSVILAC-IPLVYLCFLVGGAALSALLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGK | |||||||||||||
5 | 5y78A | 0.11 | 0.10 | 3.70 | 1.46 | Neff-PPAS | TLKVGFYFFLWYFFNFIFNIANKRTLNMWKYPWVLSTIQLGVGALYCTFLWVLGLRTKPNV----------------SKKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKNEKTLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSLAKAKL | |||||||||||||
6 | 5y78A | 0.09 | 0.08 | 3.17 | 1.31 | PROSPECTOR2 | SPTLKVGFYFFLWYFFNFIFNIANKRTLNMWKYPWVLSTIQLGVGALYCTGLRTKPNVSKKLIKALIWPSLGHTLGHAA--------TCMSFSLVAISFTHV-------VKSAEPVFGAVGSALVLGEFFHP------LTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKNEKTLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIFGSILVFRTPVTRLNFGSTIAIIGTMLYSLAKAKLP | |||||||||||||
7 | 6cc4A | 0.10 | 0.10 | 3.74 | 1.30 | SPARKS-K | TMFSRVLGFARDAIVARIFTDAFFVAFKLPNLLRRIFAAFSQAFVPILAEYKSKQGATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADKFALTSQLLKITFP-YILLISLASLVGAILNTWNRFSIPAFAPTLLNISMIGFALFAA-PYFNPPVLALAWAVTVGGVLQLVYQLPHLKKIGAMRVVKQMGPAILGVSVSQISLIINTIFASFLA---SGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSFASGLRLCFLLALPSAVALGILSGPLTVSLFLMTQRALIAYSVGLIGLIVVKV | |||||||||||||
8 | 5y78A | 0.09 | 0.08 | 3.04 | 1.38 | FFAS-3D | ---LKVGFYFFLWYFFNFIFNIARTLNMWKYPWVLSTIQLGVGALYCTFLWLRTKPNVSKKLIKALIWPS----------------LGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAAT------ELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKNEKTLIAQNTYALITIISFFMELPFALLLVSAIAGVSKAKLFGSIMFCSLF-----YHLYNEVSYLCLDNVSPVSFSIGNTIVIIIFGSILVFRTPVTRLNFGSTIAIIGTMLYSLA----- | |||||||||||||
9 | 5y78A | 0.08 | 0.08 | 2.97 | 1.10 | MUSTER | TLKVGFYFFLWYFFNFIFNIANKRTLNMWKYPWVLSTIQLGVGALYCTFLWVLGLRLIKALIWPSLGHTLGHAATCMSFSLVAFTHVVKSAEPVFGAVGSALVLGHPLTYLTLVPIVSGVALSAATELTFT----WTGFITAMISNVAFVTRNITSKFTMVDFK--------------------------NEKTLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVPVSFSIGNTIKRVIIIFGSILVFRTPVTLNFIGSTIAIIGTMLYSLAKAKLP | |||||||||||||
10 | 4he8F | 0.12 | 0.11 | 4.06 | 1.64 | CNFpred | DNLSGFMLLIVTGVGFLIHVYAIGYMGGDPGYSRFFAYFNLFIAMMLTLVLA----DSYPVMFIGWEGVGLASFLLIGFW-AFIVNRIGDLGFMLGMAILWAL-PDLLALAGLLLFLGAVGKSAWLPDAMAGPTPVSALIHAATMVTAGVYLIARSSFLYSVLPDVSYAIAVVGLLTAAYGALSAFGQTDIKKIVAYSTISQLGYMFLAAGVGAYWVALFHVF--THAFFKALLFLASGSVIHAL-LPQTRWHALIGALALGGLPLLSGFWSKDAILAATLTYPFG--GVGFYVGALLVAVLTAMYAMRWFVLV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |