Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | ADKAAWTGFLQLLKKHRRRRPINGVIVTVPVSDLLQGTEAGRQAQAQAIRDRLKELHDQLGVRFPVYVLVTKCDLLGGFVEFFDALGREERAQVWGMTFPLQDGMDGDAALAVFPAEFEQLEQRLQERVLARMQQERDPHKRALVYSFPQQFAGIEDVLKRFLDDVFASNRYERQALLRGVYFSSGTQEGSPLDRVMSAMAASFGLERQALAPNAASGRSYFITNLLQQVVFPEADLAGVNHALEKRRRMIQWGTVAA |
1 | 2wm2C | 0.13 | 0.11 | 3.75 | 0.57 | SPARKS-K | | HDHRVYKYLIQELDADFR-------VIVPNWRGHGLSPSEVPDFGYQEQVKDALEILDQLGVE-TFLPVSHS---HGGLVELLEQAGPERAPRGIIMDWLMWAPKPFAKSLTLLKEGTHGLFDVWLKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMAN---LTKTRP---IRHIFSQPTEPEYEKINSDFAEQHPW----FSYAKLGGPTHFIREFATAIRQ-------------------------- |
2 | 5j4oA | 0.11 | 0.09 | 3.19 | 0.80 | FFAS-3D | | -EASRQQRFNTSIRD---------------FEFWLSEAETLLAASAGNLLKKHQLLEREML---------AREDALKDLNTLAEDLLS-----------------SGTFNVDQIVKKKDNVNKRFLNVQELAAAHHEKLKEAYALFQFFQDLDDEESWIEEKLIRVSSQDYGRDLQGVQNLLLEGELVAHEPAIQNVLDMAEKLKDKAAVGQEE--------IQLRLAQF---VEHWEKLKELAKARGLKLEESL--- |
3 | 4m9qA | 0.18 | 0.09 | 2.89 | 0.45 | HHpred | | -IRGVWKKY---------LAEVHAIVYVVDAAD-----PGRFEESKMTMAEVLE---NQFMRDKPICIFANKQDLPTAAAEVVKGLGLATCRNSHNV-FPCTAKMPGRDGLKWLVGTVDREFGRLDPRVQTEAEEVRQEEARKK------------------------------------------------------------------------------------------------------------------ |
4 | 2yfaA | 0.13 | 0.10 | 3.66 | 0.70 | MUSTER | | GDIGQLNKDLTDLRIAR-------------LQYMIANGAANTLAKLDAFSKQQAYLATTFKS----------VKLLGELGDTISAY-KLSLNKM------RQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANE---------AALRQLDAALADTDNLKRQLPSEDARLQQFENAVL--AYRDAVRQ--FRDAVANITTSRAEMTVQGADIVKRSD |
5 | 4aurA | 0.10 | 0.08 | 3.03 | 0.64 | CNFpred | | --SDIVKWVLRDLN-----KLSSTIFVINKMDEVTSLDQALFDEQAAIKKANLKKLQRAADL-LNIVCVASNPSRINDLKNAATEILKTNVPEVLLVKT------GMDVVKDIVIQRVTLASRHLDNTFVEKNDEDM-HRFSNDIKQSRIEVKRLAGELFEELNLMEKQ--------------LMSQLRPLDLDDIRPFMDDELGYTEDGVGFKL----HLRIKQSVDRFF---------EQSTAVSQRLSDDITRQL |
6 | 2qu8A | 0.06 | 0.03 | 1.22 | 0.45 | HHsearch-2 | | ENRNTIEMTTITALAH----INGVILFIIDISEQCGLTIKEQ-------INLFYSIKSV-F-NKSIVIGFNKIDKCNSLSIDNKLLIKQILDNPIK-FSSFSTLT-----GVGVEQAKITACELLKNDQAESILL-------DQEQLLNTKL---------------------------------------------------------------------------------------------------------- |
7 | 3ea5B2 | 0.09 | 0.08 | 3.12 | 0.66 | Neff-PPAS | | -ADMLMGLFFRLLEKKDSAFIEDDVFYA--ISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARREFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFP----------------YVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFYGQDWVIDYIKRTRSGQLFS |
8 | 4m9qA | 0.16 | 0.08 | 2.70 | 0.52 | HHsearch | | NIRGVWKK-------Y--LAEVHAIVYVVDAADPGR-----FEES----KMTMAEVLENFMRDKPICIFANKQDLPTAAAEVVKGLGLATCRNSHNV-FPCTAKMAGQDVDHRLRDGLKWLVGTVDREFGPRVQTEAE------E------VRQEEARKKK------------------------------------------------------------------------------------------------- |
9 | 2yfaA | 0.15 | 0.12 | 3.92 | 0.74 | SP3 | | ---GSHMGDIGQLNKD--------------LTDLRITAAANTLAKLDAFSKQQAYLATTFK----------SPENVKLLGELGDTISKLSLNKM------RQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEALAQYQLISKARQQLLQVRIDVRGYIAE--NSSANEQAAL-------------RQLDAALADTDNLKRQLPSEDARLQQ------FENAVLAYR---DAVRQFRDAVANITTSRAEMTVQG |
10 | 6dxqA | 0.11 | 0.10 | 3.80 | 0.80 | PROSPECTOR2 | | VLPKAHDEWREQQKAAFKAGQADMTIFSPRASAMAPGDQSVAVPWAQACNNLIARVVDLFPETFAGVCMLP-QSPEADMTSSIAELERCVNELFIGCNLNPDPGGGHFKHPPLTDRFWYPFYEKMVELCNPAMHATGAYYLAADTIAFMQLLQGHWGRFRGLADM--LKQPSLDTLLMNNVFFDTCVYH----QPGINLLADVIDNKAVRGIDPTTGHYFDDTKRYIDALDISDQERHAIFEGNTRRRLDAKLKARGL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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