Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | IEMRKELSNKLIDKLSLFTETDMKDDVAQSFKGKLQYEAESLKMESFGLEILHTLGSIYKTKSKIFLKNQTFFGWGGFWHSVKEKGGVVKDTFSTVSTALDAQRTMEEYSKMQQDNEYHALKEAEEEEAKKSAAEQEHTPEELAEMEKYLMGKVLAAAWSGSKFEIQGTIRGVCDNILYDEEVPLKKRIDRANALKLIGEVFSAVTRTEDEDEEARIFEQLV |
1 | 1cunA | 0.09 | 0.08 | 3.10 | 1.27 | FFAS-3D | | VHQFFRDMDDEESWIKEKKLLGRDLTGVQNLRKKHKRLEAELAAH---EPAIQSV----LDTGKKLSDDNT-----IGKEEIQQRLAQFVDHWKELKQLAARGQRLEESLEYQQFVANVEEEEANEKMTLVASEDYGDTLAAIQGLLKKH--EAFETDFTVHKDRVND-VCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKA-----AAQRKAKLDENS |
2 | 1vt4I3 | 0.08 | 0.05 | 1.97 | 1.42 | HHsearch | | ---EYALHRVDHYNIPKTFDSDD------------------LIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV----FLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI--------------------CDNDPKYERLVNAILDF--------------------LPKIEENLICSKYTDLLRIALMAED----------------EAIFEEA- |
3 | 5cwmA | 0.12 | 0.10 | 3.69 | 0.97 | SPARKS-K | | LKRVEKLVKEAEELLRQAKEKGSEERTAEEAAREAKKVLEQAEKEG-DPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESG------------SEEALERALRVAEEAARLAKRVLELAEKQ------GD----PEVARRAVELVKRVAELLERIARESGSEEAKERAERVR |
4 | 4k1pA1 | 0.07 | 0.06 | 2.64 | 1.22 | FFAS-3D | | IRMLGSQSPLIQAYGLVILQQPDIKSSLTNHQKFAKANVREWIDE-YNPKLIDLNQEMYSIRFNSYYSKGNINEDEQSKADFTNAYGKLQLQVQSIQE--NMEQDLLELNRFKTVLDKDSNNLSIKADEAIKTLQGSEDQVSSFTELIDRQITTLETLLT-DWKVLNNNMIQIQKNVEEGTYTDSSLLQKHFNQIKKVSDEM---------NKQTNQFEDYV |
5 | 1kt1A | 0.19 | 0.11 | 3.49 | 0.33 | HHpred | | ------------------------------------------------KEKL-EQAAIVKEKGTVYFKGGK-------Y--------------V---QAVIQY---GKIVSWLEM-------------------EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKLVNPQNKAARLQIFMC- |
6 | 5cwqA | 0.13 | 0.12 | 4.23 | 0.84 | MUSTER | | LERESEEAERRLQEARKRSEEARERGDLKELAEALIEEARAVQE---LARVACERGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEA-------RKVSEEAREQGDDEVLALALIAIALAVLALAEVACCR---NKEEAERAYEDARRVEEEARKVKESAEEDSEVKRLAEEAEQLA |
7 | 4a1sA | 0.09 | 0.09 | 3.25 | 0.73 | CNFpred | | MNDRLGEAKSSGNLGNTLKVMGRFDEAAICCE-RHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREF-----GDRAAERRANSNLGNSHIFLGFEDAAEHYKRTLALAVEL-----GEREVEAQSCYSLGNTYTLLH---EFNTAIEYHNRHL |
8 | 1vt4I3 | 0.09 | 0.06 | 2.22 | 0.86 | HHsearch-2 | | ---EYALHRSDHYNIPKTFDSDD------------------LIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL----DFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI--------------------CDND-----------PKYERLVN-----AILDF----LPKIEENLICSKYTDLLRI-------------ALMAE---DEAIFEEAH |
9 | 2yfaA | 0.10 | 0.10 | 3.68 | 0.95 | Neff-PPAS | | IGQLNKDLTDLRIARLQYMIANGDDTAAANTLAKLDAFSKQQAYLAENVKLLGELGDTISAYKLSLNKMRQYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLE |
10 | 5ajaB | 0.09 | 0.03 | 1.22 | 0.39 | HHsearch | | --------------AERAPEAGAGEVGLEQWLETSLERINREARLHFHPEFLFRLWTCVEHWHDRH-------QRSL-DYAK--------------YRYLLL---MHKAMYTHMQQ-------------------GCPC----------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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