Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | SFTKHGFTNWKKPERLRVHVGCSNSVHNDAWRSCQDLMKQEQHIQTMYSRHSNQTKSEYRARLQASIDCVRFLLRQGLAFRGHDESEESSNRGNFLELLKFLADHNEDIKAVTLENAPSFLKVTCPDTQKDIVSACAIETTNAIIREMGDAFFSILVDESRDVSIKEQMVVVLRYVNISGQVVERFIGIEQVSSTTAQSLKEAIDRLFSRHGLSMSRVRGQGYDGASNMQGEFNG |
1 | 2bw3A | 0.17 | 0.12 | 4.08 | 0.86 | SPARKS-K | | -----------------------------------------------SHQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDI------------KFFIKVKAEYGEHVNVEELLPSPITLSRKVTSDAKEKKALIGREIKKDGASATIDLWTDNIKRNFLGVTLHYHEN-NELRDLILGLKSLDRSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLAN |
2 | 2bw3A | 0.13 | 0.10 | 3.39 | 1.18 | FFAS-3D | | --------------------------------------SHQSRELKTVSADCKKEAIE---------KCAQWVVRDCRPF-------SAVSGSGFIDIKFFI----KVKAEYGEHVNVEELLPSPITLSRKVTSDAKEKIGREIKSAVEKDGASATIDLWTDNIKRNFLGVTLHYHE-NNELRDLILGLKSLDRSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLAN |
3 | 2bw3A2 | 0.17 | 0.12 | 3.91 | 2.01 | HHpred | | --------------------------------------------------------ADCKKE--AIEKCAQWVVRDCRPFSAVS-------GSGFID-IKFFIKVKAEYGEH----VNVEELLPSPITLSRKVTSDAKEKKALIGREIKSDGASATIDLWTDNIKRNFLGVTLHYHE-NNELRDLILGLKSLDRSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLAN |
4 | 2bw3A | 0.18 | 0.14 | 4.42 | 1.03 | MUSTER | | --------------------------------------SHQSRELKTVS---------ADCKKEAIEKCAQWVVRDCRPFSAVSGS-------GFIDIKFFIKVKAEYGEHVNVEELL-----PSPITLSRKVTSDAKEKKALIGREIKSDGASATIDLWTDNIKRNFLGVTLHYHE-NNELRDLILGLKSLERSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLAN |
5 | 2bw3A | 0.18 | 0.12 | 4.03 | 0.99 | CNFpred | | ---------------------------ADCKKEAIE-------------------------------KCAQWVVRDCRPFSAVS-------GSGFIDMIKFFIKVKAEYGEHV----NVEELLPSPITLSRKVTSDAKEKKALIGREIKSAGASATIDLWTDNYKRNFLGVTLHYHEN-NELRDLILGLKSLDRSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLAN |
6 | 2bw3A2 | 0.17 | 0.13 | 4.19 | 2.97 | HHsearch-2 | | -------------------------------------SHQSREL-KTVSADCK-------KE--AIEKCAQWVVRDCRPFSAVS-------GSGFID-IKFFIKVKAEYGEH----VNVEELLPSPITLSRKVTSDAKEKKALIGREIKSDGASATIDLWTDNIKRNFLGVTLHYHE-NNELRDLILGLKSLDRSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLAN |
7 | 5cwmA | 0.07 | 0.06 | 2.61 | 0.71 | Neff-PPAS | | --------------DPEDELKRVEKLVKEAEELLRQAKEKGS------EEDLEKALRTAEEAAREAKKVLEQAEKEG------DPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVERVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPVKRVAELLERIARESGSEAKERAERVREEARELQERVKE |
8 | 2bw3A2 | 0.17 | 0.13 | 4.19 | 4.46 | HHsearch | | -----------------SH-----------------QSRELKTV----SA-------DCKKE--AIEKCAQWVVRDCRPFSAVS-------GSGFID-IKFFIKVKAEYGEH----VNVEELLPSPITLSRKVTSDAKEKKALIGREIKSDGASATIDLWTDNIKRNFLGVTLHYHE-NNELRDLILGLKSLDRSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLA- |
9 | 2bw3A2 | 0.18 | 0.14 | 4.42 | 0.91 | PROSPECTOR2 | | SHQSRELKTVSADCKKEAIE-----------------------------------------------KCAQWVVRDCRPFSAVS-------GSGFIDIKFF-----IKVKAEYGEHVNVEELLPSPITLSRKVTSDAKEKKALIGREIKKDGASATIDLWTDNYIKNFLGVTLHYHE-NNELRDLILGLKSLDRSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLAN |
10 | 2bw3A | 0.17 | 0.11 | 3.76 | 1.76 | SAM | | -------------------------------------------------------------------KCAQWVVRDCRPFSAVS-------GSGFID-IKFFIKVKAEYGEH----VNVEELLPSPITLSRKVTSDAKEKKALIGREIKSDGASATIDLWTDNIKRNFLGVTLHYHE-NNELRDLILGLKSLDRSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLAN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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