Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | FNIFHILGVSHYENTHSTILAELLNPEGTHGLHNSFLKLFLDINQIEGFDSRNALVRTEVAVSEYGRIDILIESSNWAVIIENKFYAKDQPEQLKRYNEYAIGKYGVGNYMILYLTPDGRYASDDSGRGVDYRCISYKKTIIEWLGQCVGIAVHRPLVRETINQYIN |
1 | 3s1sA1 | 0.13 | 0.11 | 3.93 | 1.04 | SPARKS-K | | ---------LNNCVFSYLPSYGDDEVSVYHPICEAALNQALVNTGL----DSTYEVVHHELVGSI-EADFVIKNKKYLLIVEVKVSSTRYRLQAQSYVREANIKV---EQHYYCLTNLEIKHDPNKPVEPSPIVVGFYNRLVEAFQNIIDISVNDAGTYK------- |
2 | 5gkeA2 | 0.19 | 0.13 | 4.23 | 1.31 | HHsearch | | --DYEELALTGSE--------------------AEMAELIFENPEV--IEPGFKPLFREKAI-GTGIVAVLGRDSGNIVVLELKRRAEHAVRQLKSYVEILREEY-GDKVRGILVAPSLT-SGAKRLEGLEFRKLEPPKR--------------------------- |
3 | 2p14A | 0.11 | 0.10 | 3.46 | 0.84 | SPARKS-K | | ---------------MQDILDFY---EEKTINPPNYFEWNTYRVFKKLGSYKNLVPNFPIGNAIPGVEDILVEYEHFSILIECSLT--IGEKQLDYEGDSVVRHLQGIEAYTLFLGKSIDLSFGFNKESEPVIPLTV-DQFKKLVTQLKNPNKLKEILIKLLEEWLT |
4 | 1xmxA3 | 0.13 | 0.09 | 3.14 | 0.90 | FFAS-3D | | ---------------------------------ETLVHSTVKQIQDDMPTIQDRSLNVQVYRQLGEELDVATVVNNKLHIIECKTKGRDGDDTLYKLESLRDLLGGLQARAMLVSFRPLRHNDITRAEDLGLALIGPDEL---------------KDLKTHLTQWFK |
5 | 2ewfA | 0.10 | 0.09 | 3.34 | 0.40 | HHpred | | ---------FNDPEEVIDLLEVYHEKKNFIANKNTVFEWLTWNGFII-LG-NALEYKNNFVIAAGNQPDMEIIYEDFIVLGEVTTSKG--ATQFKRHYLNKKKELVEKELYCLFIAPEINKNTFEEFQNTRIIPLSLK-QFNMLLMVQKKKGLSSYDIKNLMVSLYR |
6 | 3s1sA1 | 0.14 | 0.12 | 4.08 | 0.93 | MUSTER | | FSYL--PSYGDDEV------------SVYHPICEAALNQALVNTGLD----STYEVVHHELVGSI-EADFVIKNKKYLLIVEVKVSSTRYRLQAQSYVREANIKVEQHEIIDFFKHDPNKPVVSQQIIEPSPIVVGFYNRLVEAFQNIIDISVNDAG------TYK- |
7 | 5liqA | 0.08 | 0.08 | 3.04 | 0.76 | CNFpred | | KKLQADFNDPRQLEEVIDLLEVYHEKKNVI-NKNTVFEWLTWNGFII---GNALEYKNNFVIDE-NQPDMEIIYEDFIVLGEVTTSK-PVTRHYLNKKKELEKQGVEKELYSLFIAPEINKNTFEE--NTRIIPLSL-KQFNMLLMVQKKLI-SSYDIKNLMVSLYR |
8 | 5gkeA | 0.17 | 0.13 | 4.32 | 0.99 | HHsearch-2 | | VELEEVYMVSVFRAE--------DYELALTGSEAEMAELIFENPE--VIEPGFKPLFREKAI-GTGIVAVLGRDSGNIVVLELKRRAEHAVRQLKSYVEILREEY-GDKVRGILVAPSLT-SGAKRKEGLEFRKLEPP-KR-------------------------- |
9 | 4oc8A2 | 0.10 | 0.09 | 3.36 | 0.91 | Neff-PPAS | | -SKAEQLPATPEDQALIEVIRQRYKEN-----PFGFEACAGALTRLLLPD--VARLDLTRPWRDGG-RDGIGRLREVDFALEAKCYGANNAVGVKEVSRLISRIKHREFGVLVTTSYVDRQAYQEVTDDGHPVILTTAQDIVGLLRSAG--VRTPTQVDAWLDGITA |
10 | 5gkeA | 0.16 | 0.13 | 4.37 | 1.31 | HHsearch | | GSRVRLLSRKPRETELEEVSVFRAEDYALTGSEAEMAELIFENPE--VIEPGFKPLFREKAI-GTGIVAVLGRDSGNIVVLELKRRAEHAVRQLKSYVEILREEY-GDKVRGILVAPSLT-SGAKRKEGLEFRKLEPP-KR-------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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