>PF14249 (330 residues) RRFFEGWYYRVTLPEDRQTFAFMYSIEDPIGGKPYSGGGAQILGPNDEYLCRTFPDVNKF WATRDELALGHWGKTDLSSLPGYLDPEIFDQHVQEGYQATATWHQGYLKDPGTGNFARWQ YSIKPIYGWGNTGQIQQSTAGWLSFLQIFEPGWQILMAHGLASGWIEWNGKRYEFTDAPA YGEKNWGGAFPQKWFWVNCNGFDKYPDLALTAGGGRRGVLWWMEEVAMIGLHYQGKFYEF VPWNSQVSWNIQPWGSWQIQARNAQYEVELTATTNLPGTPLRAPTEKGLVFACRDTMHGN LTIKLQELSGSRSKLILKASSSLCGLEVGG |
|
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RRFFEGWYYRVTLPEDRQTFAFMYSIEDPIGGKPYSGGGAQILGPNDEYLCRTFPDVNKFWATRDELALGHWGKTDLSSLPGYLDPEIFDQHVQEGYQATATWHQGYLKDPGTGNFARWQYSIKPIYGWGNTGQIQQSTAGWLSFLQIFEPGWQILMAHGLASGWIEWNGKRYEFTDAPAYGEKNWGGAFPQKWFWVNCNGFDKYPDLALTAGGGRRGVLWWMEEVAMIGLHYQGKFYEFVPWNSQVSWNIQPWGSWQIQARNAQYEVELTATTNLPGTPLRAPTEKGLVFACRDTMHGNLTIKLQELSGSRSKLILKASSSLCGLEVGG | |||||||||||||||||||
1 | 2ichB | 0.13 | 0.10 | 3.60 | 1.22 | SPARKS-K | NDFIEWWYVTGWLTPTGKPLGFQITFFRTANPDQLIIAHVALSDPAIQKIARAGFDLAYARTGNTDVKLDD-----------------WIFVRETDGRY-------RTRIEAED--FTLTFILTP------SQPLLQGENGFSRKGPGAQASYYYSEPHLQVSGIINRQGE--DIPTGTAWLDREWSSEYLDGWDWISA-NLDD--GSALAFQIRGKD--DSKIWAYAALRDASGHTRLFVSFHPIRTWRSARTQAVATRVLTGETEWQITPL---DDQELDS--RASAGAVYWEGA-----VTFTRDG----QPAGRGY------ELTG | |||||||||||||
2 | 2ichB | 0.14 | 0.12 | 3.95 | 1.10 | FFAS-3D | ---IEWWYVTGWETPTGKPLGFQITFFRTANPSHFAPDQLIIA-----HVALSDPAIGKLQHDQ-KIARAGFDLAYARTGNTDVKLDDWIFVRETD-----GRYRTRIEAED----FTLTFILTPSQPLLQGEN------GFSRKGPGAPQAYYYSEPHLQVSGIINRQGEDIPVT-GTAWLDREWSSEYLDPWDWISAN-LDDGSALAFQIRGKD----DSKIWAYAALRDASGHTRLFTSFHPIRTWRSARTQATRVLT--GETEWQITPLDDQE---LDSRASAGAVYW-----EGAVTFT------RDGQPAGR------GYELTG | |||||||||||||
3 | 2ichB1 | 0.11 | 0.05 | 1.95 | 1.04 | HHpred | DFRIEWWYVTGWLETPGKPLGFQITFFRANPSFAPDQLIVALSDPAIGLQHQKIAR----------AGFDLA----------YARTGNTDVKLDD-WIFVRGRYRTRIE----AEDFTLTFILTPSQP-LL-----QGENGFSRKGPGAPQSYYYSEPHLQVSGIINRQGEDIPV-TGTAWLDREWSSEY-------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 2ichB | 0.15 | 0.12 | 4.16 | 0.89 | MUSTER | NDFIEWWYVTGWLEPTGKPLGFQITFFRTANPSHFAPAHVALSDPAIGKLQHDQ-----------KIARAGFDLAYARTGNTDVKLDDWIFVRETDGR-----YRTRIEAED----FTLTFILTP------SQPLLQGENGFSRKGPGAPQAYYYSEPHLQVSGIINRQGEDIPVT-GTAWLDREWSSEYLDPWDWISAN-LDDGSALAFQIRGKD----DSKIWAYAALRDASGHTRLFTP---QVSFHPIRTVATRVLTG--ETEWQITPL---DDQELDSRASAGAV------------VTFTRDG---------QPA--RGYELTG | |||||||||||||
5 | 2ichA | 0.14 | 0.12 | 3.91 | 2.19 | CNFpred | --RIEWWYVTGWLETTGKPLGFQITFFRT--PDQLIIAHVALSDPGKLQHDQKIAR-AYARTGNTDVKLD-----------------DWIFVRET-----DGRYRTRIEAE----DFTLTFILTPS------PLMLQGENGFSRKGPG-QASYYYSEPHLQVSGIINRQGEDIPVT-GTAWLDREWSSE-AAGWDWISANLD---DGSALMAFQIRGKD---SKIWAYAALRDAGHTRLFTP--DQVSFHPI-VYPVATRVLTGETEWQITPLMD--DQELDSRAS--AGAVYWEG-----AVTFTRD---------GQPAGRGYMELTG | |||||||||||||
6 | 2ichB1 | 0.12 | 0.06 | 2.04 | 2.26 | HHsearch-2 | DFRIEWWYVTGWLETPGKPLGFQITFFRANPSFAPDQLIVALSDPAIGLQHQKIA--------R--AGFDLA----------YARTGNTDVKLDD-WIFVRETGRYRTRIE--AEDFTLTFILTPSQP-LL-----QGENGFSRKGPGAPASYYYSEPHLQVSGIINRQGEDIPV-TGTAWLDREWSSEY-------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 2ichB | 0.14 | 0.12 | 4.03 | 1.18 | Neff-PPAS | ---IEWWYVTGWLETPTKPLGFQITFFRTAAPDQLIIAHVALSDPAIG----------KLQHD-QKIARAGFDLAYARTGNTDVKLDDWIFVRETD---------GRYRTRIEAEDFTLTFILTP------SQPLLQGENGFSRKGPGAPQSYYYSEPHLQVSGIINRQGEDIPVT-GTAWLDREWSSEYLDPWDWISAN-LDDGSALAFQIRGKD----DSKIWAYAALRDASGHTRLFTPDQ----VSFHPIRTWRSARTQAVYPVATRVLTGETEWQITPLDRASAGAVYWEGA-----VTFTRDG----------QPAGRGYELTG | |||||||||||||
8 | 2ichB1 | 0.12 | 0.06 | 2.03 | 2.42 | HHsearch | DFRIEWWYVTGWLETPGKPLGFQITFFRANPSFAPDQLIVALSDPAIGKQHQKIA--------R--AGFDLA----------YARTGNTDVKLDD-WIFVRGRYRTRIE----AEDFTLTFILTPSQP-LL-----QGENGFSRKGPGAPASYYYSEPHLQVSGIINRQGEDIPV-TGTAWLDREWSSEY-------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 5c2vA1 | 0.07 | 0.07 | 2.87 | 0.93 | PROSPECTOR2 | EPVMTGSGMSKEVQGPVSQILFTQSPRTAKGDPIPEGSRIVLFDLNTKELKVLTNDFATAFVHKKGGGCQIWEMNIDGSGLRQMTDLKGTCRSIEEGEGDREGDWKEHGMVEKTGMIIFSGSPEGVMDEFHNPYAYTQGGKIIQRITGHVLSGIEFPHLNTTIDQITYNLFDPWLTPDFSSVQANGSRAGGEGRVMICVDNWDGAYPRPIYGNCDGEIGGTSGRSQAKIYVESPYM----NWGVGQLAAVSWDAPFEKLTGKDGGLYRSPYSYAERGDFGIWFNFSKCAAGDKVYDDPNWNDHQPAPVYVKYKPRWINTFTAGKNFGVTV | |||||||||||||
10 | 2ichB | 0.16 | 0.12 | 4.15 | 0.79 | SAM | ---IEWWYVTGWLETTGKPLGFQITFFRTANPDQLIIAHVALSDPAIGKLQHDQ------KI--ARAGFDLA----------YARTGNTDVKLDD-WIFVREDGRYRTRIE--AEDFTLTFILTPSQP-LL-----QGENGFSRKGPGPQASYYYSEPHLQVSGIINRQGEDIPV-TGTAWLDREWSSEYAAGWDWISAN-LDD--GSAL-AFQIRGKD-DSKIWAYAALRDASGHTRLFTPIRTARTQAVYP-VATRVLTG--ETEWQITPL-DDQELDSRAVYWEGAVTFTRDP-AGRGY-EL------------------------- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |