Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | HHGESPGAILVTQLLTEDNYPNWARAMLMALDAKSKLGFVDASV |
1 | 5a1uG1 | 0.13 | 0.11 | 3.95 | 1.10 | MUSTER | | MDSEPPSEISLKNDLEKGDVKSKTEALKKVIIM-----ILNGEK |
2 | 1safA | 0.12 | 0.11 | 4.02 | 1.07 | SP3 | | -KKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPG- |
3 | 5cd6A3 | 0.07 | 0.07 | 2.84 | 0.93 | SPARKS-K | | GEDLDDAFRWAIQISPRPERDYWQFHYGTWLAGRERVEEAIEQL |
4 | 2dppB2 | 0.22 | 0.11 | 3.59 | 0.30 | FFAS-3D | | ---------------TSSYYGHWIATVAYNLVDTGVLD------ |
5 | 2dllA | 0.12 | 0.09 | 3.23 | 0.22 | HHpred | | ----------FREGIDKPDPPTWKTRLRCALNKSNDFEELVERS |
6 | 5up1A | 0.18 | 0.18 | 5.91 | 0.95 | MUSTER | | HHSSGLGSHMTTVKLGDDNPEKAKKYAQKLAKIYQLTVHVHGDT |
7 | 3m1gA | 0.09 | 0.05 | 1.75 | 0.37 | CNFpred | | ---------------------PWAHRTVITRRLLGLENVISLGL |
8 | 2o61A2 | 0.09 | 0.09 | 3.45 | 0.33 | HHsearch-2 | | HFARKDLSSRPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNS |
9 | 5yfpC3 | 0.11 | 0.09 | 3.30 | 0.79 | Neff-PPAS | | -------TDLVESEPETIIILDILAFDKTFQDTLKQDKSVIGDK |
10 | 5mqiA3 | 0.28 | 0.27 | 8.34 | 0.35 | HHsearch | | HFIEQLTNYYEMMLTDRKEAASWARRMHLALKAYQLLATVNEM- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|