Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | LYRSGLIELPAPRHRYGNGDKFSRQTPEGDPKDPIIEPAGKLTPLEIQRVISKKDSYLWNEFIERYHYLGYKPLPGAQIRYLITCPLGYLGAIGFSAAAWKVQPRDTWIGWSKDQRTEKLHLVVNNSRFLILPWVNSKNLASKILSLCAKRLPGDWQDVYGYNPVLLETFVEKDRFIGTCYKAANWMFVGCTKGRGKLDIFNEYKLPVKDIYLYPLINDFRSILV |
1 | 3tcvA | 0.09 | 0.07 | 2.53 | 1.06 | SPARKS-K | | -------------------------LQNWTPRPKPERKIFEGRYVRLEPLNAQKHGDELFAASQRFTWLFETPPSDDPLFFAVIDSGKVAGRQALMRIDPANGV-------------------IEIGSIYWGPLISRRPAATEAQFLFMQYVFDV------LGYRRYEWECHNE----------NAERFG-FRFEGIFRQHMVVKGRNRDTAWFSVLPALKQAYQ |
2 | 2g0bA | 0.07 | 0.05 | 2.20 | 1.08 | Neff-PPAS | | ------------------------------------------PRKVARILVAPNERDAARRIVRTTYSFATFLEGPSATTFGLFNGEVLYGTISIINDGAQGLPMDSIYAVELAAWRGEGKKLAEVVQFAMDHTLYEAVASPFEAASLFTMV-LTYALETHIDYLCISINPKHDTF----YSLLGFTQIGALKHYGTVN-------APAIARALYVPEWRSQTLL |
3 | 1ib1E | 0.09 | 0.07 | 2.68 | 1.18 | SP3 | | -------------SGIPGSPGRQRRHLPANEFRCLTPEAAGVFEIEREAFISVSGLDEVQHFLTLC----------PELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHRPRGHS------AHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQ----PAVRRAVLMC--EDAPF----YQRFGFHPAGP--------CAIVVGSLTFTEMHCSLR-------- |
4 | 5w8aA | 0.07 | 0.05 | 2.00 | 0.90 | SPARKS-K | | -----------------------------------------GAMIHAISAVNRHLEDVLEQHFRLRHREVDSYDDEDTVYLLALEGRRVVGGHRLYPTTKPSMMSEVF--------PHLAPLIWEWSRYFVVRDRRDGALNLQLMAAVQEFCLDQGIAQ-------VSAIMETWGFV--------VTPLG---------LPALVENAWTMAATVDIRRQTLDVLH |
5 | 2g0bA | 0.08 | 0.06 | 2.44 | 0.85 | FFAS-3D | | -----------------------------------------TPRKVARILVAPNERDAARRIVRTTYEAGYAIDESSATTFGLFNGEVLYGTISIINDGAQGLPMDSIYAVELAAWRGEGKKLAEVVQFAMDHTLYEAVASPFEAASLFTMV-LTYALETHIDYLCISINPKHDTF----YSLLGFTQIGALK-------HYGTVNAPAIARALYV-PEWRSQTL |
6 | 3pzjA | 0.15 | 0.12 | 3.89 | 0.37 | HHpred | | --------SPPIAPSTPLLA--GWRSAGKAPEA-----AIRGEAVSLQPLDARHGAALFRLFASHWEHLPYGPFESDTALYVVCASDQALGFLGYRQ-VQ-------------------AHGAIEIGHVNFSPALRRTRLATEAVFLLLKTAFE-----LGYRRCEWRCDSRNA-ASAAAARRFGFQFEGTLRQA-VV------KRRNRDTHVFSLDGEWDA--- |
7 | 2yjnA | 0.09 | 0.08 | 3.18 | 0.77 | MUSTER | | ITAAGLVPVGTDVDLVDFMTHAGHDIIDYVRSLDFSERDPATLTW-------EHLLGMQTVLTPTFYALMSPDTLIEGMVLVIWEPLTFAAPIA--AAVTGTPH---RLLWGPDITTRARQNFLGLL----QPEEHREDPLAEWLTWTLEKYGPAFDEEVVVGQWTIDPAIRLDTGLK--TVGMRYVDY---NGPSVVPEWLHDEPERRRVCLT-SIEELLGAVG |
8 | 5w8aA | 0.07 | 0.05 | 2.18 | 0.95 | CNFpred | | -------------------------------------------GAMIHAISAVNYEDVLEQHFRLRHDIFEVDSDEDTVYLLALEGRRVVGGHRLYPTTKPSMMSEVFPHLAAVRGCPSDPLIWEWSRYFVVRDRRDGALNLQLMAAVQEFCLDQ-----GIAQVSAIMETW----WLPRFHEAGFVVTPLG-------LPALVENAWTMAATVDIRRQTLDVLH |
9 | 3pzjA | 0.14 | 0.11 | 3.77 | 0.61 | HHsearch-2 | | --------------SPPI--APSTPLLAGWRSAGKPEAAIRGEAVSLQPLDARHGAALFRLFASHWEHLPYGPFESDTALYVVCASDQALGFLGYRQ-VQ-------------------AHGAIEIGHVNFSPALRRTRLATEAVFLLLKTAFE-----LGYRRCEWRCDSRNA-ASAAAARRFGFQFEGTLRQA-VVKRR----NRDTHVFS--LDGEWDA--- |
10 | 5icvA | 0.10 | 0.08 | 2.81 | 1.02 | Neff-PPAS | | ------------------------------------VPSSALSEVSLRLL-CHDDIDTVKHLCGDWFPIEYPDSNKKFFSLAATYRGAIVGMIVAEIKNRTKIHKEDGDILASNFSVDT--QVAYILSLGVVKEFRKHGIGSLLLESLKDHISTTAQD--HCKAIYLHVLTTNNTAIN-FYENRDFKQHHYLPYYYSIRG----VLKDGFTYVLYINGG------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|