Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | REKAGSETFEKYSYQYHWALYRVLNDHIKANEYAVFVELHEDVVVSDSLDASKAKFEFNQVKTTKGRFTANKLVHQKKNKKCVLGKLISSGFEKPFKDRITELNLVALNDFSLTLKEEGLSLNKITLNDLSDAQFKELEDEIRKEMGISSLPSNIQFIVPELSEKNFQNDVIASIAKLVSNLFPNSHCSPVEIYRLLIDEINRKG |
1 | 4bj1A | 0.12 | 0.10 | 3.65 | 0.65 | SPARKS-K | | YQKFKSMALQELGTNYLSLSKFLSKNLRSMKNCIVFFDKVENVVIIENNDESIDHIVYFKFEQLDKIE---------PSKLTEFINVLSVLEKS--NNIAFKVLIYSNSSSTSLKKKLNTKYTVFEMPILTAQEQEYLKKMVTCQLNNKE--SNLFFEFLVFP--HPFTYLFNAYTEIIVQSRT---------FDELLDKIRNRL |
2 | 3u1kA2 | 0.12 | 0.04 | 1.39 | 0.65 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------PEIVKYTHKLAMERLYAVFTDYEH--------DKVSRDEAVNKIRLDTEEQLKEKFPEADPEIIESFNVVAKEVFRS- |
3 | 4xqkA1 | 0.14 | 0.07 | 2.49 | 0.27 | HHpred | | ------QINTGTLFEKLTLAYLKNETYKA--LYNVWLGIPVDLVAEQKN----GDLVAIQAKFYTNKVGKSEI-----------NSFVAELG----KSYYQRGLIVSTMDWNSNARETIDGIEIIGLSDLRN------------------------------------------------------------------------- |
4 | 4uosA | 0.12 | 0.11 | 3.80 | 0.64 | MUSTER | | ---GDNEEVKKMLEKMIEEIKKMLEKAIKK--------------VKEMLEKMIKEIK----KMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKIKEIKKMLENGEDSKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELG |
5 | 2rjoA | 0.09 | 0.06 | 2.41 | 0.61 | CNFpred | | ---------------DSADARVIVEACSKAGAYVTTIWNKKDLHPWDY---NPNYVAHLSYDG-------VAYGE------ETATQLFKSM------GGKGGVVALGGIF--------------------SNVPAIERKAGLDAALKK---FPGIQLLDFQVAD-WNSQKAFPIMQAWMTRFIKGVWAANDDMALGAIEALRAEG |
6 | 1vt4I3 | 0.15 | 0.09 | 3.13 | 0.97 | HHsearch-2 | | ------------------------------------------------------------------EYALHRSIV----DHYNIPKTFDSDD--LIPPYLDQY-FYSH--IGHHLKNI-EHPERMTLFRMVFLDFRFLEQKIRHDSTAWSILNTLQQLKPYIDNDPKYERLVNAILDFLPKIEENLISKYTDLLRALMAEDEEEA |
7 | 5uivA | 0.08 | 0.07 | 2.66 | 0.70 | Neff-PPAS | | -TLSDQAAHLLFSANRWELSQQIQDLLNQGY--FIILDRYIYSGIAYTLAK--------------NDFHDETISQGKNKQQLNNIDWLLSPDKGLP---KPDLTLFLTLDLEEISKRKGWGDERY----ELQQFQAKVKQCFLEILDTNKDPTIRIVDVGGKTIDQVTTQLWEIIETNKNHELINDSIQFIT------------- |
8 | 1xmxA3 | 0.16 | 0.10 | 3.26 | 0.53 | HHsearch | | LTIFGARGEFNEWLETLVHSTV-KQIQDDPTSLNVQVYNELDVATVVN-----NKLHIIECKTKGMRD-----------GDDTLYKLESLRD--LLGGLQARAMLVSFRPLRHNDITRAEGLALIGPDELK-DLKTHLTQWFKAAGGN--------------------------------------------------------- |
9 | 2plrA | 0.09 | 0.08 | 2.98 | 0.59 | SP3 | | IDGSG----------KSSQATLLKDWIELKRD----------VYLTEWNSSDWIHDIIKEA-KKKDLLTPLTFSLIHAT---DFSDRYERYILPLKSGF---IVISDRYIYTAYARDSVRGVDIDWVKKLYSFAPDIALERIKKSKRKIKPQEAGADIFPGLSPEEGFLKYQGLITEVYDKLVKDENFTPKEIQIQIRKFVGELI |
10 | 2h92A | 0.08 | 0.07 | 2.70 | 0.67 | PROSPECTOR2 | | ASELSMIYVDTGAMYRALTYKYLFAKLVDQTTLDLTYKADKGQCVILDN---------EDVTDFLRNNDVTQHVSYVASKEPVRSFAVKKQKELAAEKG---IVMDGRD----IGTVVLPDADLKVYMIASVEERAERRYKDNQLRG------------IESNFEDLKRDIEARDQYDMNREISPLRKSIEEVTDEILAMV-SQI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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