Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | IQRIQTIYLLLAAALMATFLFCPIAQFDTPDGLYSFTSQGVSTVMAEPATDGSEATIAQTSVFTATWGVLALGAVITVLSLVAIFLYKNRPNQARVCMINAFFMVTFYIIIFLSGYTFQNDLAATHTSWSAYLVMPFVALVLDILAYRAINKDEQLVRSMDRI |
1 | 6qkcI | 0.11 | 0.10 | 3.76 | 1.33 | SPARKS-K | | QVLLTTIGAFAAFGLMTIAISTDYWLYTRG--LTHSGLWRICCLEGLKRGVCVKINHYLLRVVRASSIFPILSAILLLLGGVCVAASRKRNIILGAGILFVAAGLSNIIGVIVYISANAGK---NHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERSR---- |
2 | 3rkoB | 0.14 | 0.10 | 3.37 | 1.00 | CNFpred | | PTPVSALIHAATMVTAGVYLIARTHGL-------FLMT------------------------PEVLHLVGIVGAVTLLLAGFAALV------QTDIKRVLAYSTMSQIGYMFLALGVQ---------AWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNI |
3 | 5kk2E | 0.12 | 0.12 | 4.15 | 1.13 | Neff-PPAS | | QMLLTTVGAFAAFSLMTIAVGTDYWLYSRGEVMTHSGLWRTCCNFKDHEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGLCIAASERHNIILSAGIFFVSAGLSNIIGIIVYISANAGYSYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARA |
4 | 5kk2E | 0.06 | 0.06 | 2.64 | 1.22 | SPARKS-K | | QMLLTTVGAFAAFSLMTIAVGTDYWLYSR-GEVMTWRTCCKGLCKQIDHEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGLCIERHNIILSAGIFFVSAGLSNIIGIIVYISANAGYSYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARAT- |
5 | 4xydA1 | 0.11 | 0.10 | 3.51 | 1.00 | FFAS-3D | | -QSIALVYFAVALGLFAIQVSGGL-------------LLGWIYVSPNFLSEILPFNIVRMLHTNSLIVWLLLGFMGAAYFVIPEES-EREIHSPLLAYLQLAIMVLGTLGVVVTYLFNKEGREFLEQPVWVKMGIVVAALIFMYNISMTVLQGRK-------- |
6 | 5kk2E | 0.12 | 0.12 | 4.08 | 0.26 | HHpred | | -RGVQMLLTFAAFSLMTIAVGTDYWLYSRGEVMT---HSGLWRTCNKLQIDHEDADYEADAEYLASSIFPILSVILLFMGGLCIAASERHNI-ILSAGIFFVSAGLSIIGIIVYISANAG--YSYGWSFYFGAIIAEMVGVLAVHMFIDRHKQL---RATAR- |
7 | 3ixzA4 | 0.11 | 0.10 | 3.77 | 0.89 | MUSTER | | Y--YFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSARILVIAIVFQVCIGCFLCYCMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRC-----SWWDQE |
8 | 4j05A | 0.09 | 0.08 | 3.05 | 1.00 | CNFpred | | --HFRNLLGSMLGWFLVDIAFYGINLNQ----SVVLAQIGFAGKT---------GDVYDKLFQLATGNIIVTALGFLPGYYFTLFLI-DIVGRKKLQFMGFIMSGLFLAILAGEIDHIKGPLLACFTFMQFFFNFGANTTTFIVAAELFP-SAHGISAAAGKC |
9 | 1mhsA3 | 0.11 | 0.09 | 3.32 | 0.49 | HHsearch-2 | | FHRMYAYVVLLGVVLAVGTWITVTTMYAQGENG------GI-V--QN-------------FGNMDEV----LFLQISLTENWLIFITRANGWSSIPSWQLSGAIFLVDILATCFTI-WGWFEHDTSIVVRIWIFSFGIFCGGVYYILQDSRSLEDFVVSLQRV |
10 | 6qkcI | 0.08 | 0.07 | 2.96 | 1.09 | Neff-PPAS | | QVLLTTIGAFAAFGLMTIAISTDYWLYTRGLTHSGLWRICCLEGLKRGVKINHFAEYLLRVVRASSIFPILSAILLLLGGVCVAASRVYKSKRNIILGAGILFVAAGLSNIIGVIVYISANAGKNHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERSR---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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