Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | VVRGAKMKCDKGTDTKRINLPVSHGAYSNEKPIMNESDNIVGQNISSFGICSGGCPSSGGNEKRKKCQVKILKEWMNTKEDTLVEGEPALTTDSILICAYGGVIKFITDGQ |
1 | 4jiwD | 0.16 | 0.13 | 4.20 | 1.26 | SPARKS-K | | AKLTDKGT-QHDGYYETVITAGSSTVFIDGLPAARQED-------------PLTPHDKPKHPPH---PRKIAR----GSSTVFIDGLPAARTGDAIDC--GGVVIGGGTVN |
2 | 4jiwD | 0.17 | 0.14 | 4.44 | 1.23 | MUSTER | | AKLTDKGTQHDGYYETVIT-AGSSTVFIDGLPAARQED-----------------PLTPHDKPKHPPHPRKIAR---GSSTVFIDGLPAARTGDAIDC--GGVVIGGGTVN |
3 | 4jiwD | 0.20 | 0.15 | 4.90 | 1.51 | Neff-PPAS | | ---TDKGTQHDGYYETVITAGSST-VFIDGLPAARQEDPLTPHD----------------KPKHPPHPRKIAR----GSSTVFIDGLPAARTGDAIDC--GGVVIGGGTVN |
4 | 4ku0D | 0.07 | 0.05 | 2.25 | 1.25 | SPARKS-K | | SYDKCVTAG-HEAWPPTVVNATQSKVFTGGIAVLVAGDP------------ITEHTEIKKPYETHGGVTQP------RTSKVYVTGKKAVQMADPISC--GD--TVAQASS |
5 | 4jiwD | 0.17 | 0.14 | 4.43 | 0.56 | FFAS-3D | | AKLTDKGTQHDGYYETVI-TAGSSTVFIDGLPAARQEDP---------LTPHDKPKHPPHP-----------RKIARGSSTVFIDGLPAARTGDAIDC--GGVVIGGGTG- |
6 | 4jiwD | 0.18 | 0.14 | 4.41 | 0.43 | HHpred | | AKLTDKGTQHDGYYETVIT-AGSSTVFIDGLPAARQEDPLTP------HDKPK-----------HPP--H-PRKIARGSSTVFIDGLPAARTGDAIDC--GGVVI--GGG- |
7 | 4ku0D | 0.10 | 0.08 | 2.97 | 1.20 | MUSTER | | SYDKCVTAGHEAWPPTVVN-ATQSKVFTGGIAVLVAGDPITE------HTE---------IKKPYETHGGV---TQPRTSKVYVTGKKAVQMADPISC--GDTVA---QAS |
8 | 4jiwD | 0.16 | 0.13 | 4.20 | 0.64 | CNFpred | | AKLTDKGTQHDGYYETVITAGS-STVFIDGLPAARQEDPLTP------HDKPKHP----------PHPRKIA----RGSSTVFIDGLPAARTGDAIDCG--GVVIGGGTVN |
9 | 4ku0D | 0.08 | 0.06 | 2.49 | 0.86 | HHsearch-2 | | SYDKCVTAGHEAWPPTVV-NATQSKVFTGGIAVLVAGDPITE------HTEIK---------KPYETH---GGVTQPRTSKVYVTGKKAVQMADPISCGD--TV---AQAS |
10 | 4ku0D | 0.09 | 0.07 | 2.76 | 1.43 | Neff-PPAS | | SYDKCVTAGHEAWPPTVVN-ATQSKVFTGGIAVLVAGDPITEHTEI--------------KKPYETHGGVTQP----RTSKVYVTGKKAVQMADPISC--GDTVAQASSKV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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