Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | RKQRSMQLLREQGIPVIDHLPVIVGDEDAVIRTKDEIVQRAIALCLIAVYSGGIAENGNVEEEREFIEGIIEQYGAEGFFTEKERAFLYNDAPDRTDTIQMVWMYECYWVLLWALGYVETLDFPSDICDVQSAIDCLRLAENYDAFYQNATVRSKTEILDQADLIYRYDWACVDARINNRPVAGGLNDEVVLERHRALNWLVRYMDADWDDV |
1 | 5cwqA | 0.11 | 0.09 | 3.38 | 0.72 | SPARKS-K | | EARKRSEEARERG-------------------DAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARVSEEAREQ----------GDDEVLALALIAIALAVLALAEVACCRG--NSEEAESEKAQRVLEEARKSEEAREQGD--DEVLALALIAIALAVLALAEVACCRG---NKEEAERAYEDARRVEEEARKVKESAEEQG |
2 | 4widA1 | 0.13 | 0.11 | 3.92 | 0.86 | FFAS-3D | | --QHAVDLLEKKLTEFNLGDPLFESANDDPIKTLEEIIQEVTQIKLRVQRNRRLADEIIREQLTDIRKVFSDKFEKLEQGIQNSYLLLDKLITKKDDIKDRVT----YTCMKYLLMAMQGTGGPKAINNEEHAKLFFQLYDDLTDANHDGLEKEQKEVAFHVNNFTHLVTTLGMALYK--------EGHQKNDEAM---------------- |
3 | 2ziiD2 | 0.17 | 0.08 | 2.78 | 0.25 | HHpred | | -KRRVLSVLVSRNMELSYN-EYF-------PETTSFKIIRTLALICGSYGA-NVLEYEKRDKAISRAEEIMAQFSQYPFDLEKVKEEIENN-PGH------DLQLEVIAGVFEVFSRMDML------------------------------------------------------------------------------------------- |
4 | 5cwpA | 0.13 | 0.13 | 4.41 | 0.75 | MUSTER | | AAERAQEAAERTGDPLARELKRLAQEEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELAREL--VRLAVEAAEEVQRNPS-SSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEA--AEEVQRNPSSEEVNEALKKIVKAIQEAVESLREAEEGDPEKREKARERVREAVERAEEVQRDPSG-WLE- |
5 | 5jmdA | 0.07 | 0.05 | 1.96 | 0.72 | CNFpred | | ---------------------------------PLEVSNRLQDQTTQFQLFLPSP--SFTPDFLTEFLVNYHK----------HAVHILANYSD---GNHLLFEAQRMIYAGAFFPEFKEAPA-----WRKSGIDILNRE-VNVQVYNDGGQLDPHYHLAAINIFCKALGIADVN-----GFRNEFPQEYLDTIEKMIMFYANI-------- |
6 | 2pffB | 0.14 | 0.13 | 4.34 | 0.78 | HHsearch-2 | | LIKFSAETLSTQGLNILEWLESNTPDKDY-LLSI----PISCPLIGVIQLAHYVFTPGELRS-------YLKGATHSGLVTA--VAIAETDSWE----SFFVSVRKAITVLFFIGVRYEAYP--NTSLPPSILEDSLENNEQVQDYVNKSLVNGAKNLVGPPQSLYGLNLTLRKAKAPSSRIPHLLVPASDLINKDLVKNNVSFNAPVYDTF |
7 | 5cwpA | 0.14 | 0.13 | 4.38 | 0.84 | Neff-PPAS | | -AERAQEAAERTGDPRVRELAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRN-------PSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEA--AEEVQRNPSSEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRDPSGWLE-- |
8 | 1lujB | 0.11 | 0.04 | 1.35 | 0.42 | HHsearch | | -----------------------------------------------GA--PAKSPEEMYIQQKVRVLLMLRKMG--SNLTASEEEFLRTYA--GVVSSQL----SQL---------PQHSI---DQAAEDVVMAFS---RS-E-------------------------------------------------------------------- |
9 | 2jl1A | 0.10 | 0.09 | 3.29 | 0.65 | SP3 | | RNVEKASTLADQGVEVPESLQKAFAGVSKPHYDNTLLIVQHANVVKAARDAFAEESIIPLAHVHLATEYAIRTTNIDFFVNEGLRASTESGANAGSGIVNSVTRNELALAAATVLTEEGHENVSNQPWTFDELAQILSEVVSFEEEKNFLVNAPEPFTEITAAIYDAISKSKTSDDLQGSLTPKM--------------------------- |
10 | 5d1rA | 0.09 | 0.08 | 3.19 | 0.87 | PROSPECTOR2 | | AREQIRRQLLDHGAAGL---------------SLRAIARNVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDF-------EKIRQEFGFPGDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEHHHHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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