Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | ATIFIGFGVNAILRPDHALTFFEFQPPTSVVDKQMVDSLMAVYGVRDIFMGIAIYVASYFGTRSTLGWILLAASSVAFADGIVCWTHGQGQWNHWGYAPMIAVAGSM |
1 | 5u71A1 | 0.09 | 0.08 | 3.20 | 0.83 | SPARKS-K | | GRSPIFTHLVTSLKGLWTLRAFG--------RQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGRVGIILTLAMNIMSTLQW |
2 | 4p3gA | 0.10 | 0.09 | 3.45 | 0.58 | FFAS-3D | | --------LQLLTAERAWAHAAKAAHSANTKGTGRTRSHIVSRLEKGARIAEKLAQALSDGASGAPTDILDARAYAALLRGAALFEKQNWGACLKSYAICRIIYTAL |
3 | 4o6mA | 0.10 | 0.07 | 2.79 | 0.25 | HHpred | | -----------VSLRIS-RLLADTSVTP--N----QI------TVFSFFLSLVGSALFLLNSYLLAGVIIQLHSIIDGCDGEIARLKFMEKYGAWLDFIIVFSITY- |
4 | 4ikvA | 0.08 | 0.08 | 3.27 | 0.75 | MUSTER | | AAVGMFLGLVVFVATRKKNLGLAGTYVPNPLTPAEKKKAAAIMAVGAVVIAVLLAILIPNGWFTFISLVGILGIIIPIIYFVVMYRSPKTTRSRVIAYIPLFVASAM |
5 | 3rkoB | 0.20 | 0.17 | 5.39 | 0.91 | CNFpred | | AATMVTAGVYLIARTHGLFLMT-----------PEVLHLVGIVGAVTLLLAGFAALVLAYSTMSQIGYMFLALGVQAWDAAIFHLMT-----HAFFKALLFLASGSV |
6 | 3zuxA | 0.11 | 0.08 | 3.06 | 0.66 | HHsearch-2 | | KVVIIGVIAQFAIMPATAAKWTGLPYD-------AQKALTIEVGMQNSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA---------------- |
7 | 2id3A2 | 0.15 | 0.15 | 5.04 | 0.76 | Neff-PPAS | | DLRANARLVVRTLDDPRQGRLFRALIAASLCNEQAAEALHRFYAVRVDEWAGCVRDAVARGEPDGTDPHGVVAAVSAPLYYALLNTGRSLTEADADRAARAASTAAR |
8 | 5d92D2 | 0.13 | 0.09 | 3.23 | 0.56 | HHsearch | | GSLYARGLFAAIFLPIARLADWGVSPD--------AVTVV------GTLGVMAGALIFYMGQLFWGTVVITVFVFSDIIDGLMARLLFRE----------------- |
9 | 1sb3D1 | 0.11 | 0.10 | 3.72 | 0.65 | SP3 | | GGITLLTGSNTMA-SQVAAEVLGVRLPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAA--AKKLD---AREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSG |
10 | 5gp9A2 | 0.07 | 0.07 | 2.76 | 0.53 | PROSPECTOR2 | | TKILVNMHFKQLAADHKLAIVT-QLELRQSNTELRLKINEVLKGYLNLLDELLMEGKEKGYFFQELDTRLARQMIFGTLDEVVTVMKDCKYDLTALVKPVHQLLRHR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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