Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KTVLKLEETALFILGIFLFNRLNFEWWWFLALILAPDLSMIGYAFGNKVGAVLYNLFHHKGIAILLYVLGFYLKNELLQLAGIILFSHSAMDRIFGYGLKYEKGFKYTHLGEI |
1 | 2vpyC2 | 0.16 | 0.14 | 4.72 | 1.00 | SPARKS-K | | GLMAGLFPLTALVLALGLAALLKSPWAPLRVLAGASLLLALLYPLTLPPEARGHLAGFWYGLFLLLGLGTFWQERLAPWAGLLAAAGLRALLVLAGQWQGL------------ |
2 | 4he8N2 | 0.17 | 0.14 | 4.67 | 0.65 | FFAS-3D | | --LALLVALSVVVGNLAALAQKEAKRLLAYSSIAHAGYMALALYTGNAQALGFYLLTYVLATGLAFAVLSQISPDPLLGLAFLVAMLSLL-------GLPPLAGF-------- |
3 | 6cscA1 | 0.12 | 0.11 | 3.77 | 0.25 | HHpred | | ---FVYEDAMDLIACVAAYRRAKLDWSHFTNMLGYTDLYLTIHS-DHEGNVSAHGSALSDPYLSFAAAMNGLAGYTVLVSRALGVLAQLIWSRALGFPLERPKSMS------- |
4 | 2vpyC2 | 0.17 | 0.15 | 4.96 | 0.98 | MUSTER | | GLMAGLFPLTALVLALGLAALLKSPWALFPLRVLAGASLLLALLY-LPPEARGHLLEEAGFWYGLFLLLGLGWQERLAPWAGLLAAAGLRALLVL---AGQWQGL-------- |
5 | 5oqtA | 0.16 | 0.13 | 4.43 | 0.92 | CNFpred | | LGIGAIIGTGIFVLTGVAAAEHAALVLSFILSGLACVFAALCYAEFAPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLL----------------- |
6 | 2kihA | 0.37 | 0.09 | 2.63 | 0.53 | HHsearch-2 | | -------------------------------------------------------------------------SDPLVVAANIIGILHLIIYRFFEHGLK------------- |
7 | 4hzuS | 0.07 | 0.06 | 2.58 | 0.83 | Neff-PPAS | | ----RMGLLVGGASGFLIDILTGYPVWCLFSLVIHGTQGLVVGWLLGIRSMLLPLLVGSLVMVIGYCLATTLLFGPAGLASIFGNVVQVGFGAGVTLSIPLTRLKPD------ |
8 | 3rklA | 0.20 | 0.12 | 3.68 | 0.32 | HHsearch | | KITINIK------DNTIEYGHK-----EFVLSNLQEDIAQLAKLIEEEVDTELYNLLHEYAIYLAGAT-SFI-DSENK----------------------------------- |
9 | 6a2jA3 | 0.19 | 0.14 | 4.56 | 1.44 | SP3 | | YIVVLLLFVWIIVAAVHAITSYKDQWGWISCLIFITLQALSGIMIVYSELALGFALAHSFFIACLFGVLCYFLLLIARFRYES------------------------------ |
10 | 4o6mA2 | 0.15 | 0.15 | 5.06 | 0.60 | PROSPECTOR2 | | DGWIAREINFFLSLVGSALFLLNSYLTTLLAGVIIQLHSIIDGCMESKYGAWLDGVLDRYSDFIIVFSITYVLNPVYWIIGFLAAFASLMFVAAYMRTYSPEGFAIPIALRSY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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