Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | IYVPDYFIGRTRTSDGLLGDPVNLAFLGTAEQIQSALAAAGWTRADPVTLRSSWRIITSTLSRRSYDEAPVSPLFLFGRQQDFAYQQEVDGNPAQRHHVRFWRCPDGWLLPGGRRVDWLAAGTFDTSVGLSLFTLQVTHRIDADTDVERDHIVKTVTDAEPRVVVDVIPDFSTGYHARNGGGDSIRTDGDL |
1 | 2i3dB | 0.10 | 0.08 | 3.11 | 0.70 | SPARKS-K | | NGPAGRLEGRYQPSKEKSA-PIAIILHPHPQFLFYLFQKRGFTRSQGEFLSDAASALDWVQSLHP------------DSKSCWVAGYGQLLRRPEIEGFSIAPQPNTYFLAPCPSSGLIINGDADKVAP----------------EKDVNGLVEKLKTQGILITHRTLPGANHFFNGKVDELGECEDYLDR |
2 | 5wyjB1 | 0.11 | 0.09 | 3.42 | 0.51 | FFAS-3D | | LHVPDRTPE-------DDPPPFIVAVVG----------------PPGTGKTTLIRSLVRRMTKSTLNDIQGPITVVSGKHRRLTFLECPADDLNAMLVLLLIDGNFGFEMETMGMPRVLGVATHKSQSTLRASKKRLKHRFWTEVDREILNLSRFISVMKFADRFTDLTHPELIETQGLQIDRKVAIYGYL |
3 | 3p1vA2 | 0.16 | 0.11 | 3.68 | 0.23 | HHpred | | --VSHITPHRY-LQSGNEKDCIDVAILAE-----------GYTEKE-DVFYQDAQRTCESLFSY----EPF-----R----------------S-KSKFNIVAVA--SPSTDSGVPQWK-----QTAVHSHFDT-FYSDRYLTTSRVK---SVHNALAGIPYEHIIIL--ANTDVYGGGGIYNSYTAHH-- |
4 | 3ixzA1 | 0.10 | 0.09 | 3.33 | 0.64 | MUSTER | | LWFDNHIADTTEDQSGQTFDQSS----ETWRALCRVLTLCDAVPVPKRIVIASETALLKFSELTLGN--------AMGYRERFPKVCEIPFNSTNKFQLSIHTLEDP--RDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGECQLYLSEKDYPPGYAFDVEAMNFPTSGLSF |
5 | 4uy5A | 0.15 | 0.09 | 3.18 | 0.76 | CNFpred | | ------------------GDSLLLGTDLVKDRLVRAYDDAAGVTA--AFNRNVLAVVNRELSADFDLDAFEHVAKWNSDEERIEMWLRA----RTAQHVRVAALDLEVDFAAGEEMLTEVSCKF-----------------------RPENVVAELAEAGLRQTHWWTD---------------------- |
6 | 2pffB | 0.12 | 0.10 | 3.54 | 0.92 | HHsearch-2 | | GFTPGELRSYLKGATGHSQG---------LVTAVAIAETDSWESF----FVSVRKAITVLVRYEAYPNTSLPPSILEGVPSPMLSISNLTQPAGKQVEISLRKAKAPSGLDQSRIPF------SERKLKFSNRSPFHSHLLVPAS----DLINKDLVKNNVSFNAKDI---QIPVYDTFDSDLRVL-SGSI |
7 | 3ixzA1 | 0.10 | 0.09 | 3.31 | 0.78 | Neff-PPAS | | --NHIHSADTTEDQSGQTFDQSS----ETWRALCRVLTLCPVPKRIVIGDASETALLKFSELTLGN---------AMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPR--DPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGECQLYLSEKDYPPGYAFDVEAMNFPTSGLSF |
8 | 5vlqA1 | 0.16 | 0.07 | 2.42 | 0.50 | HHsearch | | AVNPDRLKHAKALVEKAIKQKKIFAIHGPYPVIRSCLRSRGWVEKKFTC--D----L--------------MSRLLRNEDPNFFWTTKRD-AVDCRF-L-----------KK-DQML-----N---------------H---------------------------------------------------- |
9 | 2px6B2 | 0.13 | 0.10 | 3.66 | 0.62 | SP3 | | LLVNPEGPTLMRLNSVQSSERP-LFLVGSTTVFHSLASRLSIRAAPLDSIHSLAAYYIDCI-RQVQPEGPYSAFEMCSQ-----LQAQQSPAPTHNSLFLFDGSPTYTPKAKYHGNVMLLRAKTGGDYNLSQVDGKVSVHVIEGEGSGLESIISIIHS--------SLAEPRVS----------------- |
10 | 3k2iA2 | 0.08 | 0.08 | 3.26 | 0.76 | PROSPECTOR2 | | LPPGGRVRATLFLPPGPGPFPG-IIDIGLLEYRASLLAGHGFANMDNISLEYFEEAVCYMLQHPQVKGPGISMASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGRSELYAQTVSERLQAHGKEKPQIICYFPLCPASLHRLLNKHVIWGGEL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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