Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LALVPARRSADIPAAIGWTGPLNHENDVARLCAVLRTWEDRFGARVVAIGFATLAVSVAAPPATQEEAEAIAAEHYAFCPDNIEQGSGTIEAYAKDLIGAPSWHFWWD |
1 | 1ua4A | 0.06 | 0.06 | 2.45 | 0.72 | SPARKS-K | | SVGLN---EVELASIMEILLLAHDPVDPIAVTEAMLKLAKKTGVKRIHFHTYGYYLALTEY--KGEHVRDALLFAALAAAAKAMKGNITSLEEIREATSVPVNEKATQ |
2 | 5yh1A2 | 0.14 | 0.12 | 4.10 | 0.55 | FFAS-3D | | FNTIDVEL---------YAPKFEYPSPGKLSGIIHDHFKEQYGILTLAYGPDFAVVRASDGAKYNFDLNKIVKILAEKLPDAGVEGGGHLEAFAKEVLKLK------- |
3 | 3bofA | 0.10 | 0.09 | 3.42 | 0.37 | HHpred | | ---LTGTDPANFAITFDELLGINCSLGPEEILPIFQELSQYTDKFLVVEPNAGKPIVETVYPLKPHDFAVHIDSYYELGVNIFGGCCGTTPEFRKVLGNRKP------ |
4 | 3ztwA | 0.15 | 0.15 | 4.97 | 0.67 | MUSTER | | GLYLPRDWPVRAGRPKGGYRVVSLAWPYRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREY---DETLVLCPEEVEAVLEALEAVGLEWTHGG |
5 | 4qllA | 0.09 | 0.06 | 2.51 | 0.65 | CNFpred | | --------PYIVAHNFL-------LSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGH-YPQIMQDLVK---------- |
6 | 2arzA2 | 0.05 | 0.03 | 1.31 | 0.35 | HHsearch-2 | | -----------------------NPFAGEAERGMVEHMNSDAAAQLAGIDTEGFHLRIGAACGNPGAVRQALVQLARAERWPTV------------------------ |
7 | 3s99A1 | 0.10 | 0.07 | 2.77 | 0.59 | Neff-PPAS | | -----------------YIGPPGDFGWTYQHDQARKELVEALG--------DKVETTFLENVAEGADAERSIKRIARAGNKLIFTTSFGYMDPTVKVAKKFVKFEHAT |
8 | 5yh1A2 | 0.16 | 0.13 | 4.32 | 0.44 | HHsearch | | FNTIDVE---------LYAPKFEY-PSPGKLSGIHDHFKEQYGILTLAYGPDFAVVRASDYNFD---LNKIVKILAEKLPDAGVEGGGHLEAFAKEVLKLKA------ |
9 | 5ejdA | 0.10 | 0.06 | 2.41 | 0.79 | SP3 | | -----------------------KQLSTDAERELANIWATVLDIPIGTISASD---NFFFRGGHSIDAMKASALGRAAGMSDIFDHP-VLSELASVAV---------- |
10 | 5w7kA2 | 0.11 | 0.10 | 3.70 | 0.47 | PROSPECTOR2 | | STWQKTEWLGVLEAAVKTIPTRLPFPTTKEFMNYVRGRLEEAGFVHVYSTTISKEFQIS-----TADLYKIAAPVIPIITEQKEAHEHEILPALAKHLETGLVPQKWK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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