>PF14027 (328 residues) FHNHIVHHILTIYALGATPDEIRAAYDHNKTYQRPVLPTTQSVVESMHDKTQFQQHLGNE KHFPNYLAFFQQEIEKKGVADVLNEYLFSGSECAETMLARLFGGLLHPLIHLGFGLEFDQ PAIVAEALAQTAVHEDWIGRLYLLPVEKAAGGIGKPGKKTMLQILNEIRADKKLAGSVKW EDGNKIRDGVLKRAPDEMIKYAAQVSVSAEQMEEKLAELLNLVAYFTGAAQRPPKQVKLD FFLMHCVTSSIFLSKIVTLPYLDTRTKLRVLEWKGRADLVFYVSRGVPNLLLEEVTTYEA PNDWKTIFHESSVHPRDDGHLSKLVRAL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FHNHIVHHILTIYALGATPDEIRAAYDHNKTYQRPVLPTTQSVVESMHDKTQFQQHLGNEKHFPNYLAFFQQEIEKKGVADVLNEYLFSGSECAETMLARLFGGLLHPLIHLGFGLEFDQPAIVAEALAQTAVHEDWIGRLYLLPVEKAAGGIGKPGKKTMLQILNEIRADKKLAGSVKWEDGNKIRDGVLKRAPDEMIKYAAQVSVSAEQMEEKLAELLNLVAYFTGAAQRPPKQVKLDFFLMHCVTSSIFLSKIVTLPYLDTRTKLRVLEWKGRADLVFYVSRGVPNLLLEEVTTYEAPNDWKTIFHESSVHPRDDGHLSKLVRAL | |||||||||||||||||||
1 | 4hb4C | 0.08 | 0.07 | 2.86 | 1.00 | CNFpred | --HNINTLSWAIGSISMSEDTEKRFVVTVIKDL-------LGLCEQKGKDNKAVVASDIMYVVGQYPRFLKAHWN--FLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQEPFIQTIIRDIQKTTADLQPQQV---------------HTFYKACGIIISEE-----RSVAERNRLLSDLMQLPNMAWDTIVEQSLLLDSETVKIIANIIKTNVAVCTSMGAD--YPQLGHIYYNMLQLYRAVSSMISAQ-TPKVRGLRTIKKEILKLVETYISKA---RNLDDVVKVLVEPLLNAVLEDYMNNVARDAEVLNCMTTV | |||||||||||||
2 | 2pffB | 0.12 | 0.11 | 3.79 | 1.20 | HHsearch-2 | SHGSLEHVLLVPTASFFIASQLQEQFNKILPE--P-TE-GFAADDEPTTPAELGKFLGYVLEGNDIHALAAKLLQENDTKELIKNYIFDKKSNNAQLVAIFYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKV-------------FTQGLNILEWLENPSNTP----DKDYLLSIPISCPLIVIQLAHYVVTAKLLGFTPGELRSYLKGLVTA---VAIAE----TDSWESFFVSVRKAVNRFLPVAS--PFHSHL-LVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDSGSISERIVDCIIRLPVKWETTTQFKATH | |||||||||||||
3 | 5vobA | 0.12 | 0.11 | 3.90 | 0.80 | SPARKS-K | FVVTVSIDDDTPMLLIFGHLPRVLFKAPYQRDNFILRQTEKHELLVLVKKDQLNSYLKDPDFLDAALSALLRNS----FHRYAVDVLKSGRMLDRRTVEMAFAYALALFAAARQEEAGASVPRALDRQAALLQIQEFMITCLSQTPPRT----TLLLYPTAVDLAKRALWTPNQITDSKQNQQHLIPQWALRQIADFALKLHKTHLASF--LSAFARQELYLMGSLVHSML----VHTTERREIFIVETGLELSHFTQL--LAHPHHEYLSDLY-----TPCSSSGRRDHSLERLTRL-FPATVPAALSILSTMQPSTLETFPDLFCL | |||||||||||||
4 | 3ay5A | 0.11 | 0.09 | 3.27 | 0.94 | FFAS-3D | --------------LASPLEQLRHLAEELRLLLPRVRVGEAT---EEFNREMFWRRL------NEAAVTVSREATT------LTIVFSQLPLPSPQETQKFCEQVHAAIKAFIAVYYLLPKDQIVDGMAQLM------EVLSVNSVWVACQQMPQIPRDNKAAALLMLTK----------------NVDFVKDAHEEMEQAVEESYWSEDDQERASKACLKKIRMLVAENGKKDQVAQLDDIVDISDEISPSVDDLALYPPMSHLTVRINSAKLVSVLKKA----------LEITKASHVTPSWIPLLINAI------DHCMNRIKEL | |||||||||||||
5 | 2pffB | 0.12 | 0.10 | 3.67 | 0.54 | HHpred | --YQTYHVLV-GDLIKFSAETLSELIRTTLDAEKVFTQG-LNILEENPSNTPDKDYLLSIPISCPLIGVIQLAHKLLGFPGELRSYLKGATGHSQG-------------------------LVTAVAIAET-DSWESFFVS-VRKAIRCYEAYPTSLPPSILEDSLENN--EGVPSPMLSLTQEQVQDYV--NKTNSHLPAGKQVEISGKGPPQSLYGLNLT-LRKA-KAPSGLDQSRIPFSERKLKFSNRFLPVAS--PFHSHL-LVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDSGSISERIVDCIIRLPVKWETTTQFKAT- | |||||||||||||
6 | 4plqA | 0.14 | 0.11 | 3.86 | 0.69 | MUSTER | ----------------GPGSELPQMVQQLSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLNEQILQE-ALWTLGNIASGGNE---QIQAVIDAGALPALVQLL---NEQILQEALWTLGNIASGGNEQIQAVIDAG-QLLSSPNEQILQEALWTLGNIASG-----------GNEQIQAVIDAALPALVQLLS----SPN--EQILQEALWTLGNIASG----------GNEQIQAVIDAGALPALVQL--LSSPN--EQILQEALWTLGNIASGG------NEQKQAVKEAGAEPALEQLQSSPNEKKEAQEALEKI | |||||||||||||
7 | 4hb2C | 0.08 | 0.07 | 2.70 | 1.00 | CNFpred | --HNINTLSWAIGSISMSEDTEKRFVVTVIKDL-------LDLCVKKGKDNKAVVASDIMYVVGQYPRFLKAHWN--FLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQEPFIQTIIRDIQKTTADLQPQQV---------------HTFYKACGIIISEE------SVAERNRLLSDLMQLPNMAWDTIVEQS-LLDSETVKIIANIIKTNVAVCTSMGADFYPQL-GHIYYNMLQLYRAVSSMISAQ-TPKVRGLRTIKKEILKLVETYISKA---RNLDDVVKVLVEPLLNAVLEDYMNNVARDAEVLNCMTTV | |||||||||||||
8 | 1vt4I3 | 0.08 | 0.04 | 1.43 | 0.68 | HHsearch-2 | -------------------------------------------------------------------------------------------------------------------------------------EYALHRS-----------------IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERM---TLFRMVFLDF----RFLEQKIRH-DSTAWN----A-----SGSILNTLQQLKFYK--PYICDNKYERLVNAILD-----FL----PKIE-----ENLICSKYTDLLRIALMAE-DEAIFEEAHKQV | |||||||||||||
9 | 1hz4A | 0.09 | 0.09 | 3.23 | 0.80 | Neff-PPAS | SRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQH-DVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQ-------------LPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFERSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVI-EGEAMAQQLRQLIQLNTLP---------ELEQHRAQRILREI | |||||||||||||
10 | 1vt4I3 | 0.07 | 0.03 | 1.26 | 0.64 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------EYALH-----------------RSIVDH-YNIPKTFSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT---LFRMVFLDFRFLEQKIRHD-S----TAW----NA-----SGSILNTLQQLKFYK--PYICDNDYERLVNAIL-----DFL----PKIE-----ENLICSKYTDLLRIALMAE-DEAIFEEAHKQ- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |