Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | SIPTGQILVRDPLYYLGNRQEQPYFQTVPAGTYRTEVCVVKPDEEDCARYAAVRVKFADAPAVRFEEALIGHEDLTDLGEGEFFGFNVDAGLACICDKQLHHAFCDFKEKWHKEHPGENLYDHYFAALFAESFRQNPQYQREGGDWLNWQIPGTEYHLPIFQSGFGDGAYPVYWGYDETGAICQIVV |
1 | 5c2vB2 | 0.10 | 0.07 | 2.76 | 0.72 | SPARKS-K | | -------------------SNLRDVVYTPDGKYIAVTHQTPKNWLPQVFTNNVTIIETKAGGKVARLPLDDLNYDGNPPKGKYLYIGVRGHRVTILDDKVLGLVRSSQEELDYLRDDLGL--------VRDYLVARVPTGLPDGKFCYAANYFSNNVTVIRTAVD---------------------- |
2 | 3or8A | 0.10 | 0.08 | 2.96 | 0.55 | FFAS-3D | | ----------HPYYPFNGKQAEDYLRSKERGDFVIR------QSSRGDDHLAITWKLDKDLFQHVDIQELEKENPLALGK----VLVVEG--QRYHDLDQLQNKIRLLNELTSNEKFKAGTKKEVVKFIEDYSKVN----------------PKKSVYYFSLNYENPGWFYLIFKLNAESKLYIWNV |
3 | 4mqdA | 0.14 | 0.04 | 1.28 | 0.29 | HHpred | | HVTENGIHIESI--------SKRLSFDLPKGDYQLTCWTVPAES--------------DLHADTYIIDAVSV------------------------------------------------------------------------------------------------------------------- |
4 | 6eqoA2 | 0.09 | 0.09 | 3.31 | 0.69 | MUSTER | | GASSGYHFSFMGKGGEARPDEMLARANLRGGESVLLYYGPGSHELADEKGLEMVEAARLMKARMVIVTTSDGEFLQSLGLEDAVEGIVSIEGLFHWPDTLPRLPDARTDIENFKIGVRAYQQNTMKPFGTAVGKLLRSPGNPRGVPDLVIERAGQDTLGVSTSLVKPFGGRVIYAEEMAGRRYTFYA |
5 | 6b67A | 0.12 | 0.09 | 3.20 | 0.80 | CNFpred | | --------------------------------PKMEKHNAQGQG-NGLRYGLSSMQGWRVMEDAHTAVIGL---PSGLE--SWSFFAVYDGHAGSVAKYCCEHLLDHITNNQDFKGSVENVKNGIRTGFLEIDEHMRVM-RSGSTAVGVLIS--PQHTYFINCGE----SRGLLCRN--RKVHFFTQ |
6 | 4mqdA | 0.14 | 0.09 | 2.91 | 0.61 | HHsearch-2 | | SISYHQFTVFQKDSTPPVDWTDAIGYAAADGA--ISFEAQ-----RNT-KAFILFRLNSSETNSYEKK-------------VTVPFHVTENGIHIESI---S------KR------------------------------------LSFDLPKGDYQLTCWTVPAES---------DLHADTYIIDA |
7 | 4mboA2 | 0.08 | 0.06 | 2.36 | 0.72 | Neff-PPAS | | --------------------NSPSVTEHTNVKTNVRSRIMKLDDERQTETYITQINPEGKGLGNLYTIIGSDGSPVNLLNAEVKILKTNSKNL-----------------------TDSMDQNYDSPEFEDVTSQYSYTNDGSKITIDWKTNSSTTSYVVLVKIPQSGVLYSTVSDINQTYGSKYSY |
8 | 4mqdA | 0.14 | 0.04 | 1.28 | 0.70 | HHsearch | | HVTENGIHIESI--S----KRLS--FDLPKGDYQLTCWTVPAES--------------DLHADTYIIDAVSV------------------------------------------------------------------------------------------------------------------- |
9 | 5g52C2 | 0.05 | 0.04 | 1.75 | 0.78 | SP3 | | ------------FILRNKTGYAPYYAGVWHSFNNSNSLVFRWGSASDQIAQWPTISVPRGELAFLRIKDGKQAAVGTQPWRTMVVWPSGHGYNIGIPTYNAERARQLAQHLYGGGSLTD--EKAKQLFVPANQQGPGKVSNGNPVWEVMRAPL---------------------------------- |
10 | 3ewkA | 0.12 | 0.11 | 3.81 | 0.69 | PROSPECTOR2 | | LVLQGRILYANNSGYHGKAYIRDMWRTISRGNIWQGEFCNRRKDGTRYDSTIVPLMDNAGKPRQYISIRRDITAQAMDANSEMILLTDRAGRIIYANPALCRFSGELLGQSPSILDSPLADQETLAAMQEALQAGQ---------------PWSGRLLNRRRTGPAPHDAEDYWAHTDGNGLVGYVQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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