Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | NLYVFQGSMSRDSVNLVENDTSSELWHRRLSHMSEKGIDSLAKKNLLSGVKQAKLKKCVHCLAGKQ |
1 | 4rfaA2 | 0.13 | 0.12 | 4.21 | 1.03 | SPARKS-K | | NLAVEGTEDEERNEIVLPNFINQSVLARYCRTNISNLLTELVEEEFLINKKSPYRIDKDSLD---- |
2 | 3l2rA | 0.13 | 0.12 | 4.23 | 0.50 | FFAS-3D | | --YFVKVSRPEGVKIIPPQSDRQKIAHN-LAHTGREATLLKIANLYWPNMRKDVVGRCQQCLITNA |
3 | 3l2rA | 0.12 | 0.12 | 4.24 | 0.31 | HHpred | | -TYFLEDGKPEGVKIISDRQKIVLQAHN-LAHTGREATLLKIANLYWPNMRKDQLGRCQQCLITNA |
4 | 6o7gB | 0.13 | 0.11 | 3.70 | 0.98 | MUSTER | | SLVT-HAPYVEEDLLIQCRHCERWMHAGCESLFTEDDVEQAADEGFD----------CVSCQPYVV |
5 | 5hb1A | 0.09 | 0.06 | 2.32 | 0.53 | CNFpred | | ---------------------SLRLFEQVAGSLTPANLTTAVEQYISLKYYAGAIQLCLTVAQQKD |
6 | 3l2rA | 0.12 | 0.12 | 4.26 | 0.62 | HHsearch-2 | | YTYFLEDGKVEGVKIISDRQKIVLQAHN-LAHTGREATLLKIANLYWPNMRKDQLGRCQQCLITNA |
7 | 6o7gB | 0.12 | 0.09 | 3.20 | 0.89 | Neff-PPAS | | -------PYVEEDLLIQCRHCERWMHAGCESLFTEDDVEQAADEGFD----------CVSCQPYVV |
8 | 3l2rA | 0.12 | 0.12 | 4.24 | 0.68 | HHsearch | | YTYFLEDGKVEGVKIIPDRQKIVLQAHN-LAHTGREATLLKIANLYWPNMRKDQLGRCQQCLITN- |
9 | 2l9yA2 | 0.10 | 0.08 | 2.80 | 0.84 | SP3 | | ------GGGGGTATVTVQQGDTLRDIGRRFD-CDFHEIARRNNIQNEDLIYPPTKGG--------- |
10 | 3zpv1 | 0.13 | 0.11 | 3.65 | 0.33 | PROSPECTOR2 | | G----AMAIYDNDEAVFCESGCNFFFHRTCVGLTEAAFQMLNKEV-------FAEWCCDKC---VS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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