Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | LFIDRVLKALGLTKAKTYPPKTDNALRTLHQHLCEANISIHHRLSIFYYILLDFDTSQTRAQASSRFAVASGVPKNYQIFMKGLWLLDHQQFEKALEYIAHPSLTTDFADEIMTALVRHAPEGDYTLPLSYFHTVQPILKTSEALELLFNAMARTSVTEAFYYSRTHSESVRGQLFRQLVSSVLNAPLGEETAARATELIGLPFDGTEEEWFEEFLTQ |
1 | 5c9sB | 0.14 | 0.13 | 4.55 | 1.08 | FFAS-3D | | -DFERLLIG--------NPNSEIEKARELAERALKNFREEAEKLNIWIAMLNLENTFGTEETLEEVFSRACQYMDSYTIHTKLLIYEISEKFDKAAELFKATKFGGEKVSIWVSWGDFLISHNEEQEARTILGNALKALPKRNHIEVVRKFAQKGDPERGRSLFEGLVADARIDLWNVYVDQEVKAKDKKKVEDLFERIITKKITRKQKFFFNKWLQ- |
2 | 5a9q1 | 0.13 | 0.12 | 4.11 | 1.34 | HHsearch | | TIVELFFQEVARKHSQTG--LNWPEMITAITQLLW-PSNPG---CLFLECLMGNCQY----VQLQDYIQLLH-PVGSCRFMLGRCYLVTGEGQKALECFCQAASRLQYYDKVLRLLDVIGL---PELVIQLATSAITEAGDKSQATIFKHHLDLGHNSQAYEALTQIPDSRQLDCLRQLVVVLCERSQ-------LQDLVEFPYVNLHNEV-VGIIE- |
3 | 3mkrB | 0.16 | 0.15 | 4.86 | 1.00 | SP3 | | --MRLLHDQVGV--------TQFGPYKQLFLQTYARGRALPCLPSMYGYPNRNWKDAGLKNGVP---AVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKLPKETLEQQKRICEMAAYHS---------NLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEVAQQTRKILSA |
4 | 4xl5C | 0.09 | 0.08 | 3.15 | 0.80 | SPARKS-K | | -KVEMYIKNLQDD--------SPPVRVYAAFALGKIGVEPLIKAASVRYAAATALGQIGDERAVEPLIKALK-DEDGYVRTAAAEALGQIGDERAVEPLIKALKDPWVRLTAARALGEIGDERAVEPLIKAL-----KDEDPWVRLTAARALGQIGDERAVEPLIKALKDEDASVRKAAAVALGQIG-DERAVEPLIKALKDE-DEYVRQRAASALGK |
5 | 3txmA | 0.10 | 0.10 | 3.54 | 0.99 | FFAS-3D | | --LIALYFDTA----------LYTEALALGAQLLREKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSAKVQGALDLQSGILHAADERDFKTAFSYFFDSVDSVKALTSLKYMLLCKIMLGQSDDVNQLVSAITYSGRDIDAMKSVAEASHKRSLADFQAALKEYKGTLYDTMLEQNLCRIIEP-YSRVQVAHVAESIQLP-MPQVEKKLSQMILD |
6 | 5a9q1 | 0.14 | 0.12 | 4.25 | 0.67 | HHpred | | -IVELFFQEVARKHSQTGLN--WPEMITITSYLLQLLWPSNP-GCLFLECLMGNCQY----VQLQDYIQLLH-PVGSCRFMLGRCYLVTGEGQKALECFCQAAPRLQYYDKVLRLLDVIGL---PELVIQLATSAITEAGDKSQATLFKHHLDLGHNSQAYEALTQIPDSRQLDCLRQLVVVLCERSQ-------LQDLVEFPYVNLHNEVVG-IIE- |
7 | 3u44A | 0.13 | 0.13 | 4.44 | 0.74 | MUSTER | | LIGDEVLDELFEDEYA----KGEKAFFELVDRYTTDR-HDLDLQFLVKQVYEYSRSHPNPEAWLESFVHLYDVSEKSLPFYQYVKEDIAMVLNGAKEKLLRALELTDNFLDDLAQIDELIQHQDDFSELYKRVPAVSDPALLDEATDLRNGAKKLLEKLKTDYFTRSPEQHLKSLAEMKPVIETLVQLVISYGKRFEAAKQ--IDSDLEHYCLAILTA |
8 | 5iwwD | 0.14 | 0.12 | 4.26 | 0.87 | CNFpred | | FTFSSVLKACA---------GALELGKQIHGYVIKSGFE---GNVVVYNALIDMYSKCGLLEEARKVFDEM-DVVTYNTLIDGLCKA--GKLDEALKLFEEMVPDEFTFSSVLKACARLG---ALELGKQIHGYVIKFESNVVVYNALIDMYSKCLLEEARKVFDEMPE-KDVVTYNTLIDGLCKAGKLDEALKLFEEMVGIKPDEFTFSSVLKACAR |
9 | 5a9q1 | 0.14 | 0.12 | 4.24 | 0.89 | HHsearch-2 | | TIVELFFQEVARKHIQTGL--NWPEMITAITQLLW-PSNPG---CLFLECLMGNCQY----VQLQDYIQLLH-PVGSCRFMLGRCYLVTGEGQKALECFCQAASRLQYYDKVLRLLDVIGL---PELVIQLATSAITEAGDKSQATLFKHHLDLGHNSQAYEALTQIPDSRQLDCLRQLVVVLCERSQ-------LQDLVEFPYVNLHNE-VVGIIES |
10 | 5xw7A | 0.11 | 0.11 | 3.81 | 0.77 | Neff-PPAS | | QLLSQVRLGEATKR--------EDLVRQSLYRLELIDPDNPDVIAARFRYLLRQGDNASAAYKSSVTSMTLSGAEGRQALQQARLQATTGHVPEALAAYDANPPEGDLAVEYWALVAKV-PARRSEAITQLKALNARNPGNAALQNSLAQLLFGERDAEAYAVLEQMSSAGREAAAGLWYQQIQRMPVSDASVKALQRFLTVFSSGDTVDSARTQLAA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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