Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LKESMAKFDAAGAKLIAIGVGTPDKARILADGLPFPVDSLYADPERKAYNVLGLYHGVGRTLFSPASAKIYSRFDSIKKATKNYTLEGTPADLTGVLQQGGMLVFRGKELLYSWKDEG |
1 | 5k1gA | 0.12 | 0.08 | 3.02 | 1.01 | SPARKS-K | | YIVLADQLKAKGVLIASVSVNDAFVMKAWGEAQNAEEILMLADGDASFTKALGLEMDTAGFG--------------------------------GLRSQRYAMIIDNGVVTTLNVEAP |
2 | 3hjpA | 0.23 | 0.17 | 5.31 | 1.17 | CNFpred | | FRDSMAKFNEVNAVVIGISVDPPFSNKAFKEQNKI-NFTIVSDFNREAVKAYGVAGELP-------------------------------ILKGYVLAKRSVFVIDKGIVRYKWVSED |
3 | 5k1gA | 0.12 | 0.08 | 3.02 | 1.11 | Neff-PPAS | | YIVLADQLKAKGVLIASVSVNDAFVMKAWGEAQNAEEILMLADGDASFTKALGLEMDTAGFG--------------------------------GLRSQRYAMIIDNGVVTTLNVEAP |
4 | 2pwjC | 0.16 | 0.11 | 3.68 | 1.04 | HHsearch | | YKHNIDKFKAKGVSVICVAINDPYTVNAWAEQAKIE---FYGDFDGSFHKSLELTTDLSAG---------------------LL------G----IRSERWSAYVVDGKVKALNVEE- |
5 | 2pwjC | 0.16 | 0.12 | 3.94 | 1.00 | SPARKS-K | | YKHNIDKFKAKGVSVICVAINDPYTVNAWAEKIQAKAIEFYGDFDGSFHKSLELTTDLSAGLLGI-------------------------------RSERWSAYVVDGKVKALNVEES |
6 | 3gknA | 0.13 | 0.09 | 3.25 | 0.92 | FFAS-3D | | FNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAF-PLVSDGDEALCRAFDV------------------------------IKEKNMYGKQVLGIERSTFLLSEGQVVQAWRKVK |
7 | 4f82A | 0.14 | 0.10 | 3.46 | 0.86 | HHpred | | YVEHAEQLRAAGIEIWCVSVNDAFVMGAWGRHTKVR---MMADGSAAFTHALGLTQDLSA--------R-------------GM------G----IRSLRYAMVIDGGVVKTLAVEAP |
8 | 2xhfA | 0.13 | 0.09 | 3.25 | 0.92 | MUSTER | | YLSLYDKFKEEGYTIACIAVNDPFVMAAWGKTVDPEHKRMLADMHGEFTRALGTELDSSKML-------------------------------GNNRSRRYAMLIDDNKIRSVSTEPD |
9 | 4f82A | 0.15 | 0.11 | 3.71 | 1.13 | CNFpred | | YVEHAEQLRAAIDEIWCVSVNDAFVMGAWGRDLHTGKVRMMADGSAAFTHALGLTQDLSA-------------------------------RGMGIRSLRYAMVIDGGVVKTLAVEAP |
10 | 2pwjC | 0.17 | 0.12 | 3.92 | 0.65 | HHsearch-2 | | YKHNIDKFKAKGVSVICVAINDPYTVNAWAEQAKIE---FYGDFDGSFHKSLELTTDLSAG---------------------LL----------GIRSERWSAYVVDGKVKALNVEES |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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