Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | ITPADIESNISGEYFFTAASATQGCPQLPPLALLTFCVLVLKNGFTVTGESACASPENFDAELGQKIARQNAIQKIWPLMGYELRSKL |
1 | 2l6mA | 0.09 | 0.08 | 3.07 | 0.99 | SPARKS-K | | DIEHKVYQLLKDQFGTKCVIEEVKSSHKTHLTKYYGFSFFRHGNIVAYGKSR-------KVANAKYIMKQRLLKLLEDKSNLLLYSCN |
2 | 1rq0A2 | 0.14 | 0.11 | 3.86 | 0.58 | FFAS-3D | | IRPEDL-----KIETFRASGYVNKTE-------SAVRITHLPTGIVVSCQN------ERSQYQNKQTALRILRARLYQLQKEQKEREI |
3 | 6fb3A | 0.15 | 0.14 | 4.57 | 0.32 | HHpred | | ----------KDTHYFVKIGSADSTKVLDSGVNVTFTNIEFQYSTLLINIRYGLTADTLDEEKARDQARQRALGSAWAKEQQKARDGR |
4 | 3tdgA1 | 0.13 | 0.12 | 4.35 | 0.89 | MUSTER | | --QDNLVSVIERILEIKPLKSSQDLKIEDPDTKYNIPLVVSKDGNLIIGLSNIFFSNKSDDVQLVAETNQKVQALNATQQNSAKLNAI |
5 | 1mkmA | 0.16 | 0.14 | 4.53 | 0.65 | CNFpred | | TNPRVLKRELEKRGYAVDNEEN-------EIGIMCVGVPIFDNGYPVAGVSISGVARKFTEEKIEEYSLKEKAEEISRKLGY------ |
6 | 6fb3A | 0.14 | 0.12 | 4.30 | 0.38 | HHsearch-2 | | SADSDLVTLAVNVTVSQPT-------LLINGRTRRFTNIEFQYSTLLINIRYGLTADTLDEEKARDQARQRALGSAWAKEQQKARDGR |
7 | 2b7vA | 0.14 | 0.10 | 3.50 | 0.82 | Neff-PPAS | | --VMILNELRPGLKYDFLS------ESGESHAKSFVMSVVV-DGQFFEGSGRN-----------KKLAKARAAQSALATVFNLHL--- |
8 | 2fggA | 0.09 | 0.08 | 2.99 | 0.40 | HHsearch | | -SEHVGKTCQIDVLIEEHD-----------ERTRAKARLSWAGRQVGVGLARL-DPADPVAQIGDELAIARALSDLANQLALTSSDI- |
9 | 3ugvA | 0.09 | 0.08 | 3.08 | 0.76 | SP3 | | ------TLTFRKLTARPVQRPVTARIATIPDWPLILIDIETEEGVPGRAYLEPYVPKAMKHDMSDMLAPAEIYDKTRKSLHFVGYAGL |
10 | 2l6mA | 0.10 | 0.09 | 3.38 | 0.47 | PROSPECTOR2 | | MKGDIEHKGTKCVIEEVKSSHKTLLNTELHLTKYYGFSFFRHGNIVAYGKSR-------KVANAKYIMKQRLLKLLEDKSNLLLSKKK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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