Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | FGTYLGGYWILKFILFPLGLTIPFLSFLFVGLTLCVPFMGYYYVRMYRNTVCSGSISFLHAWIFTVFMYMFAALLTAVAHYIYFRFIDHGFVINAYESQIDILNKSGVPDIEAYTNMFQETLETVKSLTPIDITMQLVSWNVFCGSLLALPTALFVMR |
1 | 5aymA2 | 0.07 | 0.07 | 2.83 | 0.87 | SPARKS-K | | ILSYALLWLLAAYLKDEMRLPETEIGLFRGLGAVFGLISTVSFPYLVRRLG------LISSSRWHLGFQGVTLGIAVTAFVFLGCILLSRVGLYGFSNGEFELRQRLIPE--GRRGELNSLSSLTTTSATLILFSAGSLKYLVYVSLAAVLLANVVFI |
2 | 2b6pA | 0.13 | 0.12 | 4.20 | 1.00 | FFAS-3D | | ---FFASLFYVFFGLGASLRWAGPLHVLQVALAFGLALATLVQAVG---HISGAHVNPAVTFAFLVICYMVAQLLGAVAGAAVLYSVTPPLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLMNPARSFAPAILTVYWVGPVIGAGLGSLL-- |
3 | 6iu3A | 0.06 | 0.04 | 1.98 | 0.28 | HHpred | | --------------DIIIGVSDGLTVPFA----------LAAGLS-------GANASSSIVLTAGIAEVAAGAISMGLGGYLAA-KSEADNYARELKREQEEIIRVELARYGIEPHEYGPVVNALRKKRALQSAFTIAIAYVLGGLVPLIPYMFIP-- |
4 | 4hzuS | 0.14 | 0.13 | 4.34 | 0.79 | MUSTER | | ENTIAAVLIAMTVALSILVVPIPATKGIVTLCEVGIYTSAILY----------GR---RMGLLVGGASGFLIDILTGYPVWCLFSLVIHGTQGLVVGWLLPRHHKGIRSMLLPSLVMVIGYCLATTLLFGWPAGLASIFGNVVQVGFGAGVTLSIVGP |
5 | 4u8yA | 0.09 | 0.08 | 3.15 | 0.96 | CNFpred | | KTLVEAIILVFLVMYLFLQ--NFRATLIPTIAVPVVLLGTFAVLAAF-----GFSINTLTMFGMVLAIGLLVDNAIVVVENVERVMAEEGPPKEATRKSMGQIQGALVG----IAMVLSAVFVPMAFFGSTGAIYRQFSITIVSAMALSVLVALILTP |
6 | 5mg3D | 0.12 | 0.09 | 3.37 | 0.53 | HHsearch-2 | | QGLEAGLLVSILFMIIFYKK-FGLIATSALIANLILIV---GIMSL---L-PGATLS----------MPGIAGIVLTLAVAVDANVLINE---RIK----EELSNG----RTV-QQAIDEGYRTLIKVIILYGAIKGFAITTGIGVATSMFTAIVGTR |
7 | 4tkrA | 0.09 | 0.07 | 2.66 | 0.86 | Neff-PPAS | | AAGFAGLLWGLLHFLTKAYILMPSQAIIEYILAFSFIAFSGVFSKQVRSNLAANQ--LKKAIEWAWGTMIIGGVARYFWHYVAGVLFWGAYA--------------------------------FQGWGAQLFSIVMNGASCLGTVLVSGIIISILLK |
8 | 5aonE | 0.10 | 0.03 | 1.16 | 0.44 | HHsearch | | ---------------------------------------------------------------------EREKRVSNAVEFL----LDSRVRRTPTSSKVHFLKS-----KGLSAEEICEAFTKVG-------------------------------- |
9 | 6iu3A2 | 0.10 | 0.09 | 3.27 | 0.74 | SP3 | | IGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLDPKR----ALQSAFTIAIAYVLGGLVPLIPYMFI------PVARKAVVASVILTLMA---------LLIFGYAKGYFTDNKPFKSALQTALIGAIASAAAFGMAKAVQSE |
10 | 5h7cA3 | 0.03 | 0.03 | 1.68 | 0.71 | PROSPECTOR2 | | DSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKSELVNEIVKQLEEVAKEATIEKILEELEQQSAFYEILSLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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