>PF13830 (309 residues) PADLIAAVPYLLGFHPADSVVVVAMRGRRITFAARADLPEPASEADPPARHLAEVIARQH ADSATVIGYGPAARVTPAVDAVRAALAGAGLAVLDALRVTDGRWWSYLCTEPECCPPDGS PYDPGASAVPAAAVVAGQVALPDRAALVAQVAPVGGPVRVAMRRATDRAERRLTDLLDQA PPADLLGGRSLRAAGVAAVRAALRRHRRGERLTDDEVAWLSLLLTHLPVRDHAWDRTDGR DADIALWTDVLRRAEPELTAAPASLLAFAAWRAGQGALAAVALERALTEHPDYTLAALLD DLLRRGVPP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | PADLIAAVPYLLGFHPADSVVVVAMRGRRITFAARADLPEPASEADPPARHLAEVIARQHADSATVIGYGPAARVTPAVDAVRAALAGAGLAVLDALRVTDGRWWSYLCTEPECCPPDGSPYDPGASAVPAAAVVAGQVALPDRAALVAQVAPVGGPVRVAMRRATDRAERRLTDLLDQAPPADLLGGRSLRAAGVAAVRAALRRHRRGERLTDDEVAWLSLLLTHLPVRDHAWDRTDGRDADIALWTDVLRRAEPELTAAPASLLAFAAWRAGQGALAAVALERALTEHPDYTLAALLDDLLRRGVPP | |||||||||||||||||||
1 | 5dseA | 0.12 | 0.09 | 3.23 | 0.61 | SPARKS-K | LLLISESMANRSVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAG-------------KSARAVKVLKECIRLKP----------------------------------DDATIPLLAAKLCMGSLHWLEEAEKFAKVVTSEFKAKGYLALGLTYSLQATDAS-----LRGMQEVLQRKALLAFQRAHSLSPT----DHQAAFYLALQLAISR----------QIPEALGYVRQALQLQGDDA--NSLHLLALLLSAQKHYHDALNIIDMALSEYPENILLFSKVKLQSLCRGP | |||||||||||||
2 | 5zyqA | 0.11 | 0.08 | 2.81 | 0.96 | FFAS-3D | -----------------RGSIEIPLRDT--DEVIELDFDQLPE-----GDEVISILKQEHTQ-------------LHIWIALALEYYKQG-----------------------------------KTEEFVKLL---------EAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMADGRACFCLLEGDKMDQADAQFHFVLNQSPGKACISFNKKDYRGALAYYKKALRTNPG-CPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVL------ | |||||||||||||
3 | 2qlcA | 0.12 | 0.04 | 1.49 | 0.37 | HHpred | ARDVFEYMKGRIPDETKEHLFVLFLSTKQILRHETITIGTLLIHPR----EIFKAAIRESAHSIILVHNHPSNADKQVTSILKKAGDLLQIELLDHVIVGNNDWFSFRDHAL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 5cwpA | 0.16 | 0.12 | 3.87 | 0.67 | MUSTER | -------------------------------------MSSDEEEARELIERAKEAAERAQEAA------TGDPRVRELARELKRLAQEAAEEVK----------------------------DPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRL--AVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLREAEES------GDPEKREKARERVREAV---RAEEVQRD--PSGLE- | |||||||||||||
5 | 4jb0A | 0.11 | 0.09 | 3.14 | 0.80 | CNFpred | TPPTVAVSNVANE---AQVPHIALAPLPIAKWSVAMPQP-----IPIMGKVLYEHMKKNNIKTVGYIGYSD-SYGDLWFNDLKKQGEAMGLKIVAEERFAR---------------------PDTSVAGQVLKLVAAN-----PDAILVGA------SGTAAALPQTSLRERG-----------KGLIYQTHGAASMDFIRIAGKSA------EGVLMASGPVMDPEGQ-----DSALTKKPGLELNTAYEAKYGP-NSRSQFAAHSFDAFK-----VLERVVPVALKTAKTQEFREAIRKALVSEKDI | |||||||||||||
6 | 2qlcA | 0.12 | 0.04 | 1.49 | 0.51 | HHsearch-2 | ARDVFEYMKGRIPDETKEHLFVLFLSTKQILRHETITIGTLTIHPR----EIFKAAIRESAHSIILVHNHPSNADKQVTSILKKAGDLLQIELLDHVIVGNNDWFSFRDHA--------LL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 1hz4A | 0.10 | 0.10 | 3.57 | 0.85 | Neff-PPAS | PDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKG--ELTRSLALMQQTEQMARQHDVWHYALWSLIFLQTAWETQEKAFQLINEQHLMHEFLVRIRAQLLWAWA--------------RLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTAMAQQLRQLIQLNTLP | |||||||||||||
8 | 2qlcA | 0.12 | 0.04 | 1.49 | 0.53 | HHsearch | ARDVFEYMKGRIPDETKEHLFVLFLSTKQILRHETITIGTLTIHPRE----IFKAAIRESAHSIILVHNHPSNADKQVTSILKKAGDLLQIELLDHVIVGNNDWFSFRDHA--------LL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 4zxhA2 | 0.11 | 0.08 | 2.91 | 0.65 | SP3 | TFCYMELSRHL----NPNTLRAIQSPGLIEA-------DAAEVAIEEMATLYIAEMQKMQPQGYFLGGWC---FGGAIAYEISRQLRQMGQQVTGIVMIDT------RAPIPENVPEDADDAMLLSWFARDLAAPYGKKLTIPAQYLREL------SPDQMFDHVLKEAKAIN-----VLPLDADPSDFRLYFDTYLANGIALQTYFKDEQEDFGESLGWDQLVKDTL---TQVDSIMYAENVVAVAQTIDQMYPIP---------------------------------------------------- | |||||||||||||
10 | 1ig8a | 0.12 | 0.11 | 3.91 | 0.89 | PROSPECTOR2 | DKHFISELPMIPGWVMDFPVVLVKLGGDFDTTQSKYRLPDAMRTTQELWEFIADSLKAQGISEPIPLGFTPNIENHDVVPMLQKQITKRNIPIEVAYYDVCSDIEKLQGKLSDDIPPSAEHVVLPRTKYDITIDEESPRPGQQTFEKMSS--------GYYLGEILRLALMDMYKQGFIFKNQDLSKFDKPFVMDTSYPARIEE---DPFENLEDTDDLFQNEFGINTTVQERKLI---RRLSELIGARAARLS----VCGIAAICQKRVYNRYPGEKAANALKDIYGWTQTSLIAALAQKRIAEGKSV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |