Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | LRDVWEFRFLNSEQLLSLHVGGVRNIKQRLSLLYQHGYLDRPTVQKTARLASSHIVYSLGRKGAETLAKNAEEREGILRRIRENEHTLPLIAHSLMISQFRVCLTLALKKQSEIKLTRWAQGNDLKSALSKRGANPPLVPDAFFVLETPTHKYPLFLEADRATMTQERFVSKLKMYWRHNREQSFQNT |
1 | 1p4xA | 0.13 | 0.12 | 4.07 | 0.64 | SPARKS-K | | LTYLFHQNTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNT----YISISEEQREKIAERVTLFDQIIKQFNLAQMIPKDSKEFLNLMMYTMYFKNIIKKHLTLSFVEFVLLKDLIETIKKQGY--------LIKERSDERKILIHM----DDAQQDHAEQLLAQVNQLLADKDHLHL |
2 | 3ctaA | 0.13 | 0.10 | 3.52 | 0.83 | FFAS-3D | | IKKIKEAAELTSSKLADMLGISQQSASRIIIDLEKNGYITR-------TVTKRGQILNITEKGLDVLYTEFADLSRILAIKTVTSQYIIQFQEKLGVDQASLPELRKIRGFRGIHIEGFKT--------------RTFGSVKAFPAKIQNIPCFVIIEI----ISDDRVSVEV--------------- |
3 | 2qwwA | 0.10 | 0.05 | 1.97 | 0.61 | HHpred | | INVIYSTPGISVADLTKRLIITGSSAAANVDGLISLGLVVK-LNKP----NDSDLTLKLSKKGEDLSKRSTANAFYKA-----KVFENLTENEIEELIRLNKKVETLLKKS----------------------------------------------------------------------------- |
4 | 5z7bA | 0.13 | 0.12 | 4.06 | 0.75 | MUSTER | | LALLSS-GPLTGYDASQRFGGSDSQIYPELRKMEAEELLVGSDVP-WGSKGATKTEYALSEKGWEALRKAWYEPVTYGPTRDPARLKAAYFEVNGDARRHLRAHIAHFEQQSMIDELKAKTHPTLARRLERSPKK-----------EHERIVAFKVLAYEGQIARAQAEIEWAEKGLKLLDTL----- |
5 | 5w1eA | 0.14 | 0.07 | 2.55 | 0.68 | CNFpred | | LGRLTGAGTLSLSALERTTGLARSTVDRLTATLARMGYVRLD-----------GRDVVLAPRLMEL------------------------GNAYLAALRLPALLSARAD--------------GLADEL---------DESVSLAVGD-RDGIRFIHQATR--------------------------- |
6 | 2obpA | 0.17 | 0.06 | 1.93 | 0.45 | HHsearch-2 | | LLVLREATPWSLPKIAKRAQLP-SVLRRVLTQLQAAGLADVSVE-AD----GR-GHASLTQEGAALAAQLFP-------------------------------------------------------------------------------------------------------------------- |
7 | 5z7bA | 0.11 | 0.10 | 3.64 | 0.75 | Neff-PPAS | | LALLSSGP-LTGYDASQRFGASDSQIYPELRKMEAEELLVGSDVPWG-SKGATKTEYALSEKGWEALRKAWYEPVTYGRLKAAYFEVGTNGDARRHLRAHIAHFEQQKIQSESMIDELKAKTHPTLARRLERSP----------KKEHERIVAFKVLAYEGQIARAQAEIEWAEKGLKLLDTL----- |
8 | 2obpA | 0.17 | 0.06 | 1.93 | 0.63 | HHsearch | | LLVLREATPWSLPKIAKRAQLP-SVLRRVLTQLQAAGLADVSVE-AD----GR-GHASLTQEGAALAAQLFP-------------------------------------------------------------------------------------------------------------------- |
9 | 3bddA | 0.15 | 0.09 | 2.86 | 1.20 | SP3 | | LQTLLKDAPLHQLALQERLQIDRAAVTRHLKLLEESGYIIRKRNPDNQRE----VLVWPTEQAREALITNPSAHHQ----AIKTSNQILTVEESEQFLATLDKLLIGLQNLPI--------------------------------------------------------------------------- |
10 | 4mnuA | 0.11 | 0.07 | 2.47 | 0.67 | PROSPECTOR2 | | LVRICENQGIIQEKLVDILKIDRTTASRAIKNLEKNGLIIKK----QNKNNKKNKLLFPTEKGQQLYPL---------------------------IIRENEYSNAVALKGFTEA------EINLTDA-------------------------------------LKKVKENIADDWLYVKKGNKRSY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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