Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MPFTFSHPAIVLPLTFLPRQWFSLTGLVIGSMTPDFEYFLRMRIKSNYSHTIDGLFWFDLPLGLLLAFIFHNIVRDSLFDNLPTILKSRFSAFRQFDWNGHFKRNWLVVTISILIGAASHIFWDSFTHDHGYFVQTIPALQNSVDFLGRQIPMLKILQHGSTLLGGLVIVFAIYKLPTNKTEKENINLKYWTILAGLTLTIIAVRLLSGLDYKQYGNVIVTAISAGLISLTIT |
1 | 3rkoB | 0.11 | 0.10 | 3.55 | 1.20 | CNFpred | | ---TNLFIASMVVLVLAD--NLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFAD-----GNNMLMWATLMLLGGAVGKSAQLPLQ---TWLADAMAGP----------TPVSALIHAATMVTAGVYLIARTHGLFLMT----PEVLHLVGIVGAVTLLLAGFAALVQDIKRVLAYSTMSQIGYMFLALGVQ |
2 | 6gs1A | 0.06 | 0.06 | 2.40 | 1.06 | SP3 | | LLI----TIVNFAFCQRWVKQYG-----------------SKPDFEPI--NYRNLLLTIIGVVALIAIATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMIVAFILMLEAIIFFVLYS-QMPTSLNFFAIRNVEHSILGLAVEQYQALNPFWIIIGSPILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGLQSIGELMIS |
3 | 6oh2A | 0.07 | 0.06 | 2.72 | 0.97 | SPARKS-K | | TLVAAAYTVALRYTRTTAEELYFSTTAVCITEVIKLLISVGLLALSENVLGSPKELAKLSVPSLVYAVQNNMAFLALSNAVYQVTYQLKIPCTALCTVLMLLSKLQWISVFMLCGGVTLVQLGFGAIAIAVCSGFAGVYFEKVLKSSDTSLWVRNIQMYLSGIVVTLAGTYLSDGAEIQEKGFFYGYVWFVIFLASVGGLYTSVVVKYTD----NIMKGFSAAAAIVLSTIAS |
4 | 2b6pA | 0.10 | 0.09 | 3.18 | 0.84 | FFAS-3D | | -------------------RSASFWRAICAEFFASLFYVFFGLGASLRWAGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLV------GSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPP------AVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTAILTRNFTNHWVYWVGPVIGAGLGSLL- |
5 | 1zrtC | 0.15 | 0.14 | 4.64 | 0.25 | HHpred | | ----YIHIFRGLYYGSYKPRQMSFWGATVITGIPGIGPSIQALGGPAVDNTLNRFFSYLLPFVIAALVAIHIWFHTT-GNNNPTGVEVRTKADAEKDWPYFVIKDLALALVLLGFFAVVAYMPNYLGHPDNYVQ-ANPL-STPAHIEWYFLPFYAILRAGVIAMFGAIAVMALAPWLDTSKVSAYRPMWFWFLVLDF---VVLTW--VGAMPTEYPYDWISLIASTYWFA--- |
6 | 6ei3A | 0.10 | 0.09 | 3.52 | 0.92 | MUSTER | | WAFGILMFIATAVFWLGRKRYHGFGAVVRSAL---LAHAPGQGRPLALAAISVLLALACLGLTEQLGLVICLCMALVLLLAGIGGGTWWQLERARGTHPDAAVDGVRALLRVLVIFALVTPFFSLFDQKASTWVLQGREMRMP---AWFTASQMQALNPLLVMLLIPFNNLVLYPLLRRLGWEPTSLRRMTSGIAFSGVAWIAVGAIQVEPMHIAWQILPYALLTFGEVLVSA |
7 | 4he8F | 0.10 | 0.09 | 3.47 | 1.17 | CNFpred | | LPDAMAGPTPVSALIHAA-TMVTAGVYLIARSSFLYSVLP-----------DVSYAIAVVGLLTAAYGALSAFGQTDIKKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHAGEQDVRKMGGLWKHLPQ----TRWHALIGALAGFWSKDAILAATLTYPF-GGVGFYVGALLVAVLTAMYAMRWFVLVFLGE-PVMLWPNHLLALGSVLAGYLAL |
8 | 2pffB | 0.11 | 0.10 | 3.71 | 0.89 | HHsearch-2 | | EPTTPAELV-GKFLGYVSSLVEPFDQVLNLC-LTEFEN---CYLEGNDIHALAAKLLQENDTTLVTKELIKNYITARIMAKRP--FDKKSNGEGNAQLDDYELYQTVGDLIKFSAETLSELIRTTLDAEKVFTLNILEWLENPSNTP--DKDYLLSIPISCPLIGVIQLAHYVVTAKLLFTKAHSQGLFFVSVRKAITVLFIGVRCY--------EAYPNTSLPPSILEDSLE |
9 | 5ezmA1 | 0.09 | 0.08 | 2.99 | 1.00 | Neff-PPAS | | GLALLAAPMWSVAAHFN----TLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKGLVGIALPGLVLVVYTLVTRDWGLWRRLH-------LALGVVVMLVITVPWFYLVSVRNP-----EFPNFFFIHEHWQRRSGSVFYFLPLVIGGFLPWAGIFPKLWTAMRAR-------FRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALD |
10 | 4o6yA2 | 0.08 | 0.04 | 1.50 | 0.35 | HHsearch | | --------------------------------------------NFYSLHSWLGLACLFLFAFQWAAGFVTYWYP-----GGSRNSRASLMPWHV----FLGISIYALALVTATTGILEKVTFLQVN--QVI----------------TRYSTEAM---LVNTMGVLILILGGFVILGVVT---------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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