Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | WLAFAAYLLHQFEEHGVDLFGQPYAFRTDLCRILSYRDPIACPVPLSFITAVNVGTVWIAGLISGLLVRRMPPIGLSFFAIPLVNALTHIGSAVVEWRYNPGLLTACVLFVPLNIWT |
1 | 4ryiA | 0.08 | 0.08 | 2.99 | 0.87 | SPARKS-K | | DALEKPSWTPPGMTIGMIWAVLFGLIALSVAIIYNNYGFK----PKTFWFLFLLNYIFNQAFSYFQFSQKNLFLATVDCLLVAITTLLLIMFSSNLSK------VSAWLLIPYFLWS |
2 | 2bs2C | 0.13 | 0.13 | 4.43 | 0.73 | FFAS-3D | | -LFLGLFMIHMFFVSTILLG--DNVMLWVTKKFELDFIFEGGKPIVVSFLAAFVFAVFIAHAFLAMRDTTLWWIQAMTGFAMFFLGSVHLYIMMTQPQYLVLLF-AVELHGSVGLYR |
3 | 4yxpA | 0.15 | 0.12 | 4.03 | 0.30 | HHpred | | ---NFIEALASADETL-----------AWCKMCIH-H---NLPLRPQDAVLDNLATRLRPF-LQCYLKRGLCGLCIASFVFVILARLANRVEATLMHFYLPGACMAGLIEILD---- |
4 | 6ei3A | 0.12 | 0.11 | 3.97 | 0.75 | MUSTER | | FIATAVFWLG----RVPLPPKDPHGFGAVVRSALLAHAPGQGRPGLALAAISVLLALACLGLTEQLGLVICLCMALVLLLAGIGGGTWWQLERARGTHPDVDGVRALLRVLVIFALV |
5 | 4he8F | 0.09 | 0.08 | 2.97 | 0.89 | CNFpred | | PTPVSALIHAATMVTAGV------YLIARSSFLYS-------VLPDVSYAIAVVGLLTAAYGALSAFGQIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIH |
6 | 1vt4I3 | 0.12 | 0.10 | 3.63 | 0.67 | HHsearch-2 | | YALHRSIVDHYNIPKTIPPYLD-QYFYSHIGHHL--KNIEHP--ERMTFRMVFLDFRFLEQKIKPYICDNDPKY------ERLVNAILDFLPKIEENICSK--YTDLLR---IALMA |
7 | 6mjpG3 | 0.10 | 0.09 | 3.47 | 0.71 | Neff-PPAS | | --------PDKLAVVTVKPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIA |
8 | 6o7ub | 0.17 | 0.03 | 1.12 | 0.29 | HHsearch | | ---------------------------------------------------------------------------------------------ILSSIWTEGLLMCLIVSALLLFV- |
9 | 6csxB4 | 0.10 | 0.09 | 3.21 | 0.60 | SP3 | | ILTPALCAT-------MLKPIFNRMFEKSTHHYTDSVGGI---LRSTGRYLVLYLIIVVGMAYLFVRLPSSFSGNQAPSLYAISLIVVFLCLAALYESWS--IPFSVMLVVPLGVIG |
10 | 3on4A | 0.10 | 0.09 | 3.52 | 0.60 | PROSPECTOR2 | | GVAVISWHTDKIAAVLSDISNNSSLFDAILTLTYNSENKCLGGFASIQNQAKKFFELIIEWLKGVLETNGYDNESSLSLAKQIISLVEGGLLLARLYG-DETFLEGVRHFI-DQTIK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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