Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | LQKERVPLKSIEVELEVRDHVATVVSTLNYENKKDKPLEAVFVFPLPGDAAVCHFSAKIGQTQIVAEVKEK |
1 | 6fpyA | 0.21 | 0.21 | 6.70 | 2.09 | SPARKS-K | | TAVDGVFIRSLKVNCKVTSRFAHYVVTSQVVNTANEAREVAFDLEIPKTAFISDFAVTADGNAFIGDIKDK |
2 | 6fpyA | 0.21 | 0.21 | 6.69 | 1.33 | FFAS-3D | | -AVDGVFIRSLKVNCKVTSRFAHYVVTSQVVNTANEAREVAFDLEIPKTAFISDFAVTADGNAFIGDIKDK |
3 | 6fpyA1 | 0.21 | 0.21 | 6.70 | 1.47 | HHpred | | TAVDGVFIRSLKVNCKVTSRFAHYVVTSQVVNTANEAREVAFDLEIPKTAFISDFAVTADGNAFIGDIKDK |
4 | 6fpyA | 0.21 | 0.21 | 6.70 | 2.21 | MUSTER | | TAVDGVFIRSLKVNCKVTSRFAHYVVTSQVVNTANEAREVAFDLEIPKTAFISDFAVTADGNAFIGDIKDK |
5 | 4g2aA | 0.15 | 0.15 | 5.18 | 1.12 | CNFpred | | VSQPHIKMVSELIRISGKNGSWHYNCNFTFKNTLNKEVTISMAFPFPIQALVYDFLVTVNDKQVSAQRGNI |
6 | 6fpyA1 | 0.21 | 0.21 | 6.70 | 2.45 | HHsearch-2 | | TAVDGVFIRSLKVNCKVTSRFAHYVVTSQVVNTANEAREVAFDLEIPKTAFISDFAVTADGNAFIGDIKDK |
7 | 6ncwA3 | 0.10 | 0.10 | 3.62 | 0.99 | Neff-PPAS | | ---GEAYLSWIHFTPFLRKDGWYGKAEICVRNLSSGRLDGSVEVEIGKNSFAVLPIVLEGEEEKSFSTEEL |
8 | 6fpyA1 | 0.20 | 0.20 | 6.31 | 3.75 | HHsearch | | TAVDGVFIRSLKVNCKVTSRFAHYVVTSQVVNTANEAREVAFDLEIPKTAFISDFAVTADGNAFIGDIKD- |
9 | 3bgaA1 | 0.07 | 0.07 | 2.86 | 0.49 | PROSPECTOR2 | | ---PKQYIADYKVSASLDKEEGIFNLEVTVEGPSATASSIAYTLKDASGKAVLQDAINIKSRGLSNFIAFD |
10 | 6fpyA1 | 0.21 | 0.21 | 6.69 | 1.03 | SAM | | -AVDGVFIRSLKVNCKVTSRFAHYVVTSQVVNTANEAREVAFDLEIPKTAFISDFAVTADGNAFIGDIKDK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|