Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | HLKWIRDLQMAFRGHGKAMRAQPSDECSLGIWIHGTAMKELGATTALKNLDTVHKQFHREVDQVI |
1 | 3t9oA | 0.16 | 0.14 | 4.58 | 1.01 | SPARKS-K | | HYQWLVSMFHSVVARD----------CQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELM |
2 | 3t9oA | 0.16 | 0.14 | 4.58 | 1.21 | FFAS-3D | | HYQWLVSMFHSV----------VARDCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELM |
3 | 4h54A1 | 0.16 | 0.12 | 4.11 | 1.13 | HHpred | | HYQWLVSMFHSVV--------------AFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELM |
4 | 3t9oA | 0.16 | 0.14 | 4.58 | 1.33 | MUSTER | | HYQWLVSMFHSVVARD----------CQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELM |
5 | 3t9oA | 0.17 | 0.14 | 4.55 | 0.68 | CNFpred | | HYQWLVSMFHSVVA------------CQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELM |
6 | 3t9oA | 0.16 | 0.14 | 4.58 | 1.89 | HHsearch-2 | | HYQWLVSMFHSVVARD----------CQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELM |
7 | 3t9oA | 0.16 | 0.14 | 4.58 | 1.36 | Neff-PPAS | | HYQWLVSMFHSVVARD----------CQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELM |
8 | 3t9oA | 0.17 | 0.14 | 4.57 | 2.55 | HHsearch | | HYQWLVSMFHSVVARD----------CQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGREL- |
9 | 3t9oA | 0.16 | 0.14 | 4.58 | 0.62 | PROSPECTOR2 | | HYQWLVSMFHSVVARD----------CQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELM |
10 | 3t9oA | 0.16 | 0.14 | 4.58 | 0.74 | SAM | | HYQWLVSMFHSVVARD----------CQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|