Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | DNNVLNYALTLENLEAAYYQQGLNALNESAFNASGFPQGVRAAISVIAAQEADHARTLTSVLGARGWPAVTPCNYTFTFTDARSFVSLLATIEGLGTEAYVGAAIGLTNKDLLNTAAGIASVEARHTAFINYLLGQ |
1 | 1ji5A | 0.12 | 0.11 | 3.93 | 1.61 | SPARKS-K | | VIEVLNKQVADWSVLFTKLHNFHWYVKGPQF------FTLHEKFEELYTESATHIDEIAERILAIGGKPVSSIQEAAYGETAEGMVEAIMKDYEMMLVELKKGMEIADDEMTSDLLLGIYTELEKHAWMLRAFLN- |
2 | 2ib0A | 0.21 | 0.20 | 6.29 | 2.05 | FFAS-3D | | DNAALCDALAVEHATIYGYGIVSAL----------SPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVLGA |
3 | 2ib0A | 0.21 | 0.20 | 6.29 | 1.11 | HHpred | | DNAALCDALAVEHATIYGYGIVSALSP----------PGVNFLVADALKQHRHRRDDVIVMLSARGVTAPAAAGYQLPVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVLGA |
4 | 4etrA | 0.16 | 0.13 | 4.42 | 1.66 | MUSTER | | TLDVLNDLLQTSKDGEAGFHACAEDLR---------DPQLKAAMLEQSRDCAAAADELERIVLELGGKP------------EEAVLNECERGEDVAKHRYQAALEKSLPAEIHQVIERQYQGVLRHHDRVRALRDA |
5 | 4am2A | 0.13 | 0.12 | 4.33 | 0.93 | CNFpred | | VIEYLNRGLRSELTAVSQYWLHYRMLEDWGYK------DLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTLDPLRIQTVKEVLESDLAAEREARALYQEGAAYAADFPSKNLFEELMGDEEHHIDFLETQLDL |
6 | 2fzfA | 0.13 | 0.12 | 4.11 | 0.77 | HHsearch-2 | | LEELLGMAIKAEIGAREFYKSLAEKIK---------IEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVKHIGELKVQDIIDLIRWAMKAEEIAAEFYLKLEEMVKEEEKKRLMRYLADMERGHYYTLRAEYEL |
7 | 4etrA | 0.16 | 0.13 | 4.42 | 1.59 | Neff-PPAS | | TLDVLNDLLQTSKDGEAGFHACAEDLR---------DPQLKAAMLEQSRDCAAAADELERIVLELGGKP------------EEAVLNECERGEDVAKHRYQAALEKSLPAEIHQVIERQYQGVLRHHDRVRALRDA |
8 | 2fzfA | 0.13 | 0.12 | 4.10 | 1.24 | HHsearch | | LEELLGMAIKAEIGAREFYKSLAEKIK---------IEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVKHIGELKVQDIIDLIRWAMKAEEIAAEFYLKLEEMVKEEEKKRLMRYLADMERGHYYTLRAEYE- |
9 | 4etrA | 0.16 | 0.13 | 4.42 | 1.18 | PROSPECTOR2 | | NLDVLNDLLQTSKDGEAGFHACAEDLR---------DPQLKAAMLEQSRDCAAAADELERIVLELGGKPE------------EAVLNECERGEDVAKHRYQAALEKSLPAEIHQVIERQYQGVLRHHDRVRALRDA |
10 | 2fzfA | 0.13 | 0.12 | 4.08 | 1.17 | SAM | | -EELLGMAIKAEIGAREFYKSLAEKIK---------IEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEKEHIGPV-VQDIIDLIRWAMKAEEIAAEFYLKLEEMVKEEEKKRLMRYLADMERGHYYTLRAEY-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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