Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | VIVYGDRAEVKRIVKCDLNEGRNELIIQNVSSVIERQSLRVDGGGAAIIQDVRYQELPLDTGDNENGKVRELEEQRSDLETEKASLDDELNILKKRVEVL |
1 | 6fkfe | 0.14 | 0.14 | 4.75 | 0.86 | SPARKS-K | | RSIWNSEVK---EIILSTNSGQIGVAVDIGILRIRLNLTLALMGGFARIGEITILVNDERGSDIDPQEAQQTLEIAEANLRQKIEANLALRRARTRVEAS |
2 | 6f5dH | 0.09 | 0.09 | 3.39 | 0.68 | FFAS-3D | | YGIYPGHAYKIVQ----LNPSPLTVEYTDGTTKVSGGFAHINNEGSCDVNTVECTLLDDLDLAIAEKELAAQQAALGSADKAKSVVEIRISVIEAVIAAL |
3 | 2yy0B | 0.15 | 0.07 | 2.36 | 0.32 | HHpred | | -----------------------------------------------------FLKHHLGAATPENPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQY |
4 | 5owvA | 0.12 | 0.12 | 4.23 | 0.67 | MUSTER | | IFQSEKFALLRLKIEKNLKSDLYELE-TNLDTVIFDTFKEFKMSEILNSLNINGAFFEFLNDKLKHKVLQSLKNQDANILNSFEENLEKIEKLKQLEMGL |
5 | 3d2eA | 0.16 | 0.13 | 4.31 | 0.56 | CNFpred | | -------VPVKLKLRCDP---SGLHTIEE---------AYTIE-KTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTL |
6 | 4c47A | 0.20 | 0.08 | 2.56 | 0.40 | HHsearch-2 | | --------------------------------------------------------DYFA----DKHLVEEMKEQQKEQETKINLLEKQQKEQEAKINLL |
7 | 5lqxH | 0.16 | 0.14 | 4.66 | 0.90 | Neff-PPAS | | EELAPGVVEVIES-----SGTASKYFVSG-------GFASILPGSKLSISTVEAHPLDAFSSENIKSLLAEAQKNASADETVAAEAAIEIEVLEALQAAV |
8 | 1kd9A | 0.31 | 0.10 | 3.02 | 0.35 | HHsearch | | -------------------------------------------------------------------EVKQLEAEVEELESELWHLENEVARLEKENAE- |
9 | 1wvlA | 0.15 | 0.12 | 4.04 | 0.72 | SP3 | | ----------MVKVKFKYKGEEKEVDTSKI--------KKVWRVGKMVSFTYDDNGKTGRGAVSEKDAPKELLDMLARAEREKKGVLKKLRAVENELH-- |
10 | 3tdgA1 | 0.14 | 0.13 | 4.43 | 0.51 | PROSPECTOR2 | | QDNLNKKVRILEIKPLKSSQDLKMVVIEDPDTK-YNIPLVVSKDGNLII------GLSNIFFSNKSDDVQLVAETNQKVQALNATQQNS-AKLNAIFNEI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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