Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | AAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALLAAVAAQVLPPLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGMAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDA |
1 | 3ecpA | 0.13 | 0.11 | 3.94 | 1.41 | SPARKS-K | | SSALGDPRRTARLVNVAAQLAKYSGK-SITISS-----EGSKAAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQ-EFPELLAIEDTTSLSYRHQVAEELGKLGSIQDKSR-GWWVHSVLLLEATTFVGLLHQEWWMRPD--------DPADADEKE--SGKWLAAAATSRLRMGSMMSNVIAVCDREAD-IHAYLQDKLAHNERFVVRSKHPRKDVESGLYLYDHLKNQPELGPQKGVVDKRGKR------------KNRPARKASLSLRSGR |
2 | 3ecpA | 0.16 | 0.13 | 4.27 | 1.27 | FFAS-3D | | SAALGDPRRTARLVNVAAQLAKYSG-KSITISS-----EGSKAAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLA--QEFPELLAIEDTTS-LSYRHQVAEELGKLGSIQDKSRGWWVHSVLLLEATTFRTVG--LLHQEWWMRPDDPAD-----ADEKESGKWLAAAATSRLRMGSMMSNVIAVCDREA-DIHAYLQDKLAHNERFVVRSKHPRKD----------------------------VESGLYLYDHLKNQPELGGYQISIPQ---- |
3 | 3ecpA | 0.12 | 0.11 | 3.84 | 1.59 | HHpred | | SAALGDPRRTARLVNVAAQLAKYSG-KSITISSEG--S---KAAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQE--FPELLAIEDTTLSYRHQVAEELGKLGSIQ-D-KSRGWWVHSVLLLEAFRTVGLHQEWWMRPDDPA--------DAD--EKESGKWLAAAATSRLRMGSMMSNVIAVCDREADI-HAYLQDKLAHNERFVVRSKHPRKDVESGLYLYDHLKNQPELGGVDKRGKRK-NRPARKA-----S-LSLRSGRITLKQG--- |
4 | 3ecpA | 0.12 | 0.11 | 3.87 | 0.79 | MUSTER | | SAALGDPRRTARLVNVAAQLAKYSGK-SITISS-----EGSKAAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQEFPE--LLAIEDTTLSYRHQVAEELGKLGSIQDKSRG--WVHSVLLLEAFRTVGLLHQEWWMRPD--------DPADADEKESG--KWLAAAATSRLRMGSMMSNVIAVCDREAD-IHAYLQDKLAHNERFVVRSKHPRKDVESGLYLYDHLKNQPELGPQKGVVDKRGKRKNRPARKASLSL---RSGRITLKQGNIT |
5 | 1muhA | 0.12 | 0.10 | 3.58 | 1.59 | CNFpred | | SAALGDPRRTARLVNVAAQLAKYS-GKSITISSEGS-----KAAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQ-EFPELLAIEDTTSLSYRHQVAEELGKLGSI--QDKSRGWWVHSVLLLEARTVGLLHQEWWMRPDDP----------ADADEKESGKWLAAAATSRLRMGSMMSNVIAVCDREAD-IHAYLQDKLAHNERFVVRSKHPRKDVE----------------------------SGLYLYDHLKNQPELGGYQISIPQKGVV |
6 | 3ecpA | 0.12 | 0.11 | 3.96 | 2.69 | HHsearch-2 | | SAALGDPRRTARLVNVAAQLAKYSG-KSITISSEG--S---KAAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQE--FPELLAIEDTTLSYRHQVAEELGKLGSIQ-D-KSRGWWVHSVLLLEAFRTVGLHQEWWMRPDDPA--------DAD--EKESGKWLAAAATSRLRMGSMMSNVIAVCDREADI-HAYLQDKLAHNERFVVRSKHPRKDVESGLYLYDKQPEIPQKGVVDKRNRPARKSGRITLK--Q---GNITLNAVLAEEIPKG |
7 | 3ecpA | 0.12 | 0.11 | 3.99 | 1.16 | Neff-PPAS | | SAALGDPRRTARLVNVAAQLAKYSGK-SITISS-----EGSKAAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQE-FPELLAIEDTTSLSYRHQVAEELGKLGSIQ-DKSRGWWVHSVLLLEATTTVGLLHQEWWMRPDDPADA----------DEKESGKWLAAAATSRLRMGSMMSNVIAVCDREAD-IHAYLQDKLAHNERFVVRSKHPRKDVESGLYLYDHLKNQPELGGYQISIPQKGVVDSLRSGRITLKQGNITLNAVLAEEPPKG |
8 | 3ecpA | 0.12 | 0.11 | 3.85 | 3.41 | HHsearch | | SAALGDPRRTARLVNVAAQLAKYSG-KSITISSEG--SK---AAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQE--FPELLAIEDTTLSYRHQVAEELGKLGSIQ-D-KSRGWWVHSVLLLEAFRTVGLHQEWWMRPDDPA--------DAD--EKESGKWLAAAATSRLRMGSMMSNVIAVCDREADI-HAYLQDKLAHNERFVVRSKHPRKDVESGLYLYDHLKNQPELGGVDKRGKRK-NRPARKA-----S-LSLRSGRITLKQGNI- |
9 | 1muha | 0.12 | 0.11 | 3.97 | 1.22 | PROSPECTOR2 | | ALHLGDPRRTARLVNVAAQLAKYSGKS----ITISSEGSK--AAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQE-FPELLAIEDTTSLSYRHQVAEELGKLGSIQ-DKSRGWWVHSVLLLEATTFRTLLHQEWWMDPADADEKESG-------------KWLAAAATSRLRMGSMMSNVIAVCDREAD-IHAYLQDKLAHNERFVVRSKHPRKDVESGPQKGVVDKRGKRKNRPARKINPPKGETPLKALRVIDILTPDECQDLMAQGIKIG |
10 | 3ecpA | 0.13 | 0.09 | 3.27 | 1.39 | SAM | | --ALGDPRRTARLVNVAAQLAKYSG-KSITISSEG-SK----AAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQEF--PELLAIEDTTSLYRHQVAEELGKLGSIQ-DKSRGWWVHSVLLLEA-TTFRTVGQEWWMRPDDPA----------DADEKESGKWLAAAATSRLRMGSMMSNVIAVCDREADI-HAYLQDKLAHNERFVVRSKHPRKDV--------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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