Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | VYAVLDAARDPRVLSLLKRAGAPYRSLYEGPEAEELASVAPYLVELTKEEALLERLIGTGWGRSWGIFLTGASPFDAVRRHLRRFLKVQEESTGKRLYFRFYDPRVLRTFLPTCTPQQQA |
1 | 2lciA | 0.11 | 0.10 | 3.61 | 0.80 | SPARKS-K | | ILILINT-NNDELIKKIKKEGYQVRDVNDSDELKKEMKKLEKILIISNDKQLLKEMLELILGYKVFLLLQDQ-DENELEEFKRKIEEVRKVTDD---------LKIVREFMQKAGSLEHH |
2 | 3v3tA2 | 0.11 | 0.11 | 3.92 | 0.57 | FFAS-3D | | -IYLLDNNKREKFNDFMNMSESHAEGVVDEDEISKLLTMKKVILEFDDKEDIQVALAKTNTCEFMGISTTRVVDVEAIKSIVGYPTFKGYNSKKNIVVATGPQKTTVQMMNEIIEDKMKQ |
3 | 1z87A2 | 0.12 | 0.09 | 3.25 | 0.30 | HHpred | | ----------------------LRCGAGSGARVLLSLAEDALTVSPADGTSVPNLSEAKHVSLKMAYVSRRCTPTD-P-E--PRYLEICA-ADGQAVFLRAKDEASARSWAGAIQAQIGT |
4 | 2lciA | 0.09 | 0.08 | 3.20 | 0.89 | MUSTER | | ILILINTNNIKKIKKEVENQGYQVRDVNDSDELKKEMKKLEKILIISNDKQLLKEMLELISKLGYVFLLLQDQDLEEFKRKIESQYEVRKVTDDEEA------LKIVREFMQKAGSLEHH |
5 | 5k5sA | 0.12 | 0.12 | 4.12 | 0.69 | CNFpred | | TIAVVGATVSTAVANLLGLFYIPQVSYA--SSSRLLSNKFKSFLRTINDEHQATAMADIIERWNWVGTIAADDYGRPGIEKFREEACIDFSE-TAKVIVVFSSGPDLEPLIKEIVRRNIT |
6 | 1vt4I | 0.17 | 0.16 | 5.21 | 0.74 | HHsearch-2 | | FWLNLKNCNSPETVKLLYQIDPNWTSIHSQAELRRLLKSKPLLVLLNVQNA--KAWNA--FNLSCKILLTTRFKQVTDFLSAATTTHISL-DHH---SMTLTPDEVKSLLLKYLNPRRLS |
7 | 2l69A | 0.11 | 0.10 | 3.65 | 0.74 | Neff-PPAS | | IVIVVFSTDERKFKDIIKKNGFKVRTVRSPQELKDSIEELTIVVVVVDDKEWAEKAIRFVKSLGAVLIIIYDQDQNRLEEFSREVRRRGFE------VRTVTSPDDFKKSLERLIREVGS |
8 | 1z87A2 | 0.12 | 0.11 | 3.80 | 0.55 | HHsearch | | ----ASGRLLELRCGAGSGAGGERW-Q----RVLLSLAEDALTVSPADGTSVWRNLSEKHVSLKMAYVSRRCTPTD-P-E--PRYLEICA-ADGQAVFLRAKDEASARSWAGAIQAQIG- |
9 | 5jyuA | 0.19 | 0.15 | 4.83 | 0.75 | SP3 | | RIVLVDEATSTLICSILTTAGYQVIW-LVDGEVERLLALTPVLLAEPDVQELVDQLRQRCTPEQLKIFILGSKHPESFLQQVTMGLTSLATSAQ-------------------------- |
10 | 2l82A | 0.09 | 0.09 | 3.48 | 0.60 | PROSPECTOR2 | | MSQIFDPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERGVDVRTVEDKEDFIREIWERYPQLDVVVIVTTDDKIKDFIEEAKEVFVVYNNKDDGVDVRTVSDKEELIEQVRRFVRKVHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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