Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | FPAGTHIGFFIAANGFWYDTGVKPNAVPYYYSLKNLNPDTQPIHKQHNVLLYDTEVQEVIIGFEDLPRAWGDNDFNDAVFSVKA |
1 | 2xr4A | 0.20 | 0.18 | 5.70 | 1.03 | SPARKS-K | | LPPHIKFGVTALTHAYIDDDPKPA------ATFKGAGAQDQNLGTKVRVIVMANKSYFGIIGSED----GADDDYNDGIVFLNW |
2 | 3oqqA | 0.21 | 0.19 | 6.07 | 1.13 | HHsearch-2 | | LVKDSRTLTLNVPAA-CEKVY-KYSGTELSPSVTLALPEDVPTETDQGYLFY-H--NTGVV-FEDGWPIQYDEDFNDVVFEYDL |
3 | 3oqqA | 0.19 | 0.18 | 5.75 | 1.61 | HHsearch | | LVKDSRTLTLNVPAA-CEKKYNTVSGTELSPSVTLALPEDVPTNETDGYLFY-H--NTGVV-FEDGWPIQYDEDFNDVVFEYD- |
4 | 2boiA | 0.20 | 0.19 | 6.10 | 1.03 | SPARKS-K | | LPARINFGVTVLVNSAATQHVEVDNEPRAAFSGNNLGTKVINSGSNVRVQITANKLNLAVVGSED----GTDMDYNDSIVILNW |
5 | 2boiA | 0.15 | 0.14 | 4.80 | 0.66 | FFAS-3D | | LPARINFGVTVLVNSAATQHVEIFVDNEPRAAFSGITANGRQSDLVSSQLVLANKLNLAVVGSED----GTDMDYNDSIVILN- |
6 | 2xr4A | 0.18 | 0.17 | 5.44 | 0.36 | HHpred | | LPPHIKFGVTALTHA-ANDQTIDIDDPAATFKGKVLDSGNGANGRPSRLGSRFKKSYFGIIGSED----GADDDYNDGIVFLNW |
7 | 2xr4A | 0.15 | 0.14 | 4.80 | 0.98 | MUSTER | | LPPHIKFGVTALTHAAND-YIDDDPKPAATFKGAGAQDQNDSGNGRVRVIVMANKSYFGIIGSED----GADDDYNDGIVFLNW |
8 | 3a71A | 0.12 | 0.10 | 3.39 | 0.65 | CNFpred | | ---STDIVLYASQDMTWD--------FVSHIAAGGEARPNNGLTPVWEPFLLAN-KGKLICYYSDQRDN---TYGQTMVHQVTN |
9 | 2xr4A | 0.15 | 0.14 | 4.80 | 0.84 | HHsearch-2 | | LPPHIKFGVTALTHAANDQTI-DIDDPAATFKGAGADSGNGANGRPSRLGSRFKKSYFGIIGSEDGA----DDDYNDGIVFLNW |
10 | 2boiA | 0.15 | 0.14 | 4.81 | 0.98 | Neff-PPAS | | LPARINFGVTVLVNSAATQHVEIFVDNEPRAAFSGVGTGDNSGSGNVRVQITANKLNLAVVGSED----GTDMDYNDSIVILNW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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