Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | ILWVVAIFDCAKSDHPNKIGWIVVIILLPFLGSILYFIFGR |
1 | 1mztA | 0.13 | 0.12 | 4.24 | 1.97 | SPARKS-K | | -AKAAFDSLQASATEYIGYAWAMVVVIVGATIGIKLFKKF- |
2 | 1p49A1 | 0.12 | 0.12 | 4.27 | 1.57 | MUSTER | | TLLTLAALNCLGLLHVPLGVFFSLLFLAALILTLFLGFLH- |
3 | 1p49A1 | 0.12 | 0.12 | 4.27 | 1.13 | Neff-PPAS | | TLLTLAALNCLGLLHVPLGVFFSLLFLAALILTLFLGFLH- |
4 | 3dl8C | 0.19 | 0.12 | 3.93 | 1.65 | SPARKS-K | | ---------------KATISVIIFSLAIGVYLWILDLTFTK |
5 | 6exsA2 | 0.08 | 0.07 | 2.93 | 0.33 | FFAS-3D | | -YILIGLVGLGYGHTQFSVNWVILSYVICVIGELCLSPTG- |
6 | 4pe5A | 0.16 | 0.10 | 3.24 | 0.22 | HHpred | | ---------------FQSCLWLLVGLSVHVVAVMLYLLDR- |
7 | 2yevC | 0.17 | 0.17 | 5.61 | 1.34 | MUSTER | | AALVTLFFYLILNPRVRFVLFMLLLILLAAGTVALMLLIGK |
8 | 5xtcr | 0.10 | 0.10 | 3.63 | 0.76 | CNFpred | | SHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANS |
9 | 6nbqD | 0.20 | 0.12 | 3.90 | 0.42 | HHsearch-2 | | ----------------STFPWLTTIILFPIVAALAIPFIPD |
10 | 2xndJ | 0.05 | 0.05 | 2.32 | 0.94 | Neff-PPAS | | GTVFGSLIIGYARNPSYAILGFALSEAMGLFCLMVAFLILF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|