Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | PEFNQWMGTLKPHSASLVFASSYLNSPSSMFGHTFLRIDPENVEEGSTWLSYAVNFGAELNAEDNSILYAYKGLFGGYPGFFSVIKYYEKIKEYSRIENRDLWEYNLNLTPQETRRMTTHLWELRNVDFEYYFFDENCSYRLLELLEFARPGSSLRDEFGVRAIPIDTVRAV |
1 | 4gveA | 0.13 | 0.12 | 4.01 | 0.83 | SPARKS-K | | LIVRAAVSELDPSNTIWLDIEGPPTDP------VELALYQPAKK-------QYIHCFRKPHDEPGVLSYVIGLLPPNMV--ITTQGSDDIRKLLDIH-GRDLKLIDVKFTSDQAHQVWDKFGHLHNGVIEPH-----CALLDCIMFHSAMSGELPKEEPI-PLLPKEFLFFP |
2 | 2if6A | 0.12 | 0.09 | 3.27 | 0.80 | FFAS-3D | | ----------QPQTGDIIFQISRSSQSKAIYSHTGMLVMRNK---------KPYVFEAVGP---------------------VKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDCSEVVWKVYQNALGGKNIPLE-ETVVSPQAVFDA- |
3 | 2if6A | 0.12 | 0.09 | 3.10 | 0.48 | HHpred | | --------QPQTGD--IIFQISRSSQTHSDYSHTGMLVMRNKK-------PYVFEAV------------------G----PVKYTPLKQWIAHGE---KGKYVVRRVELSVEQQQKLAQTAKRYLGKPYDFSFSWSYCSEVVWKVYQNALG-MRVGELEETVVSPQAVFDAP |
4 | 1z6aA | 0.12 | 0.11 | 3.92 | 0.61 | MUSTER | | TKIFKAVKELKSKYRIALTGTPIENKVDDLW--SIMTFLNPGLLGSYSEFKS--KFATPIKKGDNMAKEELKAIISPF----ILRRTKYDKAIINDLPDKIETNVYCNLTPEQAAMYKAEVENLFNNIDSVT--GIKRKGMILSTLLKLKPALLKGGEQSVRRSGMEIIEEA |
5 | 3s99A | 0.08 | 0.07 | 2.76 | 0.75 | CNFpred | | ADAERSIKRIARAGNKLIFTTSFYMDPTVKVAVKFEHATGYK------TADNMSAYNARFYEGRYVQGVIAAKMSKKGIAGYIGSVVVQGINSFMLGAQFRVKVIWVWFDPGKEADAAKALIDQ-----VDIITQHTDSTAAIQVAHDR----------GIKAFGQASDMIK |
6 | 2if6A | 0.12 | 0.09 | 3.27 | 0.70 | HHsearch-2 | | -------WQ--PQTGDIIFQISRSSQTHSDYSHTGMLVMRNKK-------PYVFEAV------------------G----PVKYTPLKQWIAHGE---KGKYVVRRVELSVEQQQKLAQTAKRYLGKPYDFSFSWSYCSEVVWKVYQNALG-MRVGELEETVVSPQAVFDAP |
7 | 4o6hA | 0.16 | 0.16 | 5.24 | 0.91 | Neff-PPAS | | MLLKDLMGGIDPNAPTWIDIEGRFNDPVEIANGQFIHFYREPVDQKQFKQDSKYSHGMDLADLFNAQPGLTSSVIGALPGMVLSCQGSDDIRKLLDSQNRDIKLIDVEMTREASREYEDKVWDKYGRDKKKKEITPHCALMDCIIFESASKARLPDLKTVHNILPHDLIFRG |
8 | 2if6A | 0.12 | 0.09 | 3.10 | 0.96 | HHsearch | | -------WQPQTGD--IIFQISRSSQTHSDYSHTGMLVMRNKK-------PYVFEAV------------------G----PVKYTPLKQWIAHGE---KGKYVVRRVELSVEQQQKLAQTAKRYLGKPYDFSFSWQYCSEVVWKVYQNALG-MRVGELEETVVSPQAVFDA- |
9 | 2l82A | 0.16 | 0.13 | 4.27 | 0.57 | SP3 | | ------------MSQIFVVFS---SDPEIL----------KEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKFRENIREIWERPQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFVVYNNKD--DDRRKEAQQEFR-----SDGVDVRTVKEELIEQV |
10 | 1xwyA | 0.07 | 0.07 | 2.83 | 0.58 | PROSPECTOR2 | | KDRDDVVACAFDAGVNGLLITGTNLRESQQYSSCWSTAGVHIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVNMPVFMHCRDAHERFMTLLEPDKLPGAVLHCFTGTREEMQACVLELRELPRDLTPKPSSRRNEPAHLPHILQRIAHWRGE---------DAAWLAAF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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