Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | IGFDRLLQQGFSQDDVTDLRRQFLSIYGSDNTSSGGDIADVEEDEHRQNRLRQLEERWIESTSNNEAAGTANEQTPLTQDGDQAQAATTPSQPMDLDESRVNEDLLLGFCVGVFLGIISVVFLLADDSVFNKRQKMSIIAGLFINFSLAIVR |
1 | 4zwjA | 0.07 | 0.07 | 2.93 | 0.94 | SPARKS-K | | ALINMVFQMG--ETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAMCGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT-PLNYILLNLAVADLFMVLGG |
2 | 2wtbA3 | 0.13 | 0.12 | 4.09 | 0.65 | FFAS-3D | | -GFNRLVECGADPYLIDRAISKFFRLC------------DLVGFGVAIATATQFIENFSERTYKSMIIPLMQEDKDPELKKYIEKARSISGVKLDPKLANLSEKDIIEMTFFPV--VNEACRVFAEGIAVKADLDIAGIMGMIMFWAIGS-- |
3 | 5f42A2 | 0.11 | 0.04 | 1.43 | 0.47 | HHpred | | ---EGLKRRGFTPEEMKKIKEVYKVLYRKGLM--------------MKEAFEIIKEMAKEDKVLEPFVDVIGT------------------------------------------------------------------------------- |
4 | 3nrgA2 | 0.14 | 0.11 | 3.82 | 0.75 | MUSTER | | TDFAYLRWLLDVGIQFQFHNPRLAQIAYKALYDDVPLPAETQVRHGSFAYFKQLVEQGIADGS---------------------------VPDLDADT---AAFVLNVVFTELGNHLIERFAVLLREGGIVLLQPARRVIEQVIDILERGRR |
5 | 6c3oE | 0.09 | 0.05 | 2.00 | 0.72 | CNFpred | | EGLTTIRAF----RYEARFQQKLLEYT---------------------DSNNIASLFLTAANR-----------------------------------WLEVRMEYIGACVVLIAAVTSISNSLHR----LSAGLVGLGLTYALMVSNYLNW |
6 | 5f42A2 | 0.09 | 0.05 | 1.77 | 0.36 | HHsearch-2 | | CGINTLKRRGFTPEEMKKIKEVYKVLYRKGLM--------------MKEAFEIIKEMAKEDKVPFVDVIGTRRGILRDPNSSS-------VDKLAAALEHH--------------------------------------------------- |
7 | 3nrgA2 | 0.11 | 0.09 | 3.32 | 0.76 | Neff-PPAS | | -DFAYLRWLLDVIQFQFHNPRLAQIAYKALYDDVPLPAETQVIRHGSFAYFKQLVEQGIADGS-------------------------LVPDLDADTAAFVLNVVFTELGNHLIERFAVNPAELLREGGIVLLQPARRVIEQVIDILERGRR |
8 | 5f42A2 | 0.11 | 0.06 | 2.13 | 0.70 | HHsearch | | CGIEGLKRRGFTPEEMKKIKEVYKVLYRKGLM--------------MKEAFEIIKEMAKED--KVLEPFVDVIGTS----RRGILDPNSSSVKLAAALEHH--------------------------------------------------- |
9 | 1kn7A | 0.05 | 0.03 | 1.20 | 0.71 | SP3 | | ----------------------------MEVAMVSAESSGCNSHMPYGYAAQARARERERLAHSRAAAAAAVAAATAAVEGTGGSGGGPHHHHQTRGAYSSHD------------------------------------------------- |
10 | 1t56A | 0.09 | 0.08 | 3.01 | 0.64 | PROSPECTOR2 | | RPLADAKGAGISDRVVNQADMALQTLAENPADTD------------RENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTDRGAAPRTLPAHELATALNLMNERTLF-----ASFAGEQPSVPEARVLDTLVHIWVTSIYG--E |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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