Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | WSEWYDGSLQTPGYDGGDFETFDDLRAKGYEVCKAPRAVQCRAEKFPNIPLKDLNQKVECSTTAGLICYNKDQISTMCNNYEIRILC |
1 | 2quoA | 0.16 | 0.15 | 4.99 | 1.03 | SPARKS-K | | LYDWRSSNSYPWTQKLNLHLTITA---TGQKLASKIVDFNIYSNNFNLVKLEQSDHYVDISLDAGLVMKANSSYSGN-YPYSILFQK |
2 | 5eqxA1 | 0.08 | 0.07 | 2.71 | 0.35 | FFAS-3D | | --EWKPCREGEDNSKRNPIAKITSDYQATQ-------KITYRISGVGIDQ--PPFGIFVVDKNTGDINITAIVDREETPSFLITC-- |
3 | 1sujA2 | 0.20 | 0.16 | 5.14 | 0.24 | HHpred | | --------EPVDGVVLIDPEYLKDRKVFVTLTCADL--YSLATQVYPLTPLKKLGAHYPFCFKMG--------TNLPCSDFEVKAFC |
4 | 3iydD | 0.11 | 0.11 | 4.10 | 0.69 | MUSTER | | FTDMIDGQTITDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQ |
5 | 4k8rB | 0.13 | 0.08 | 2.79 | 0.67 | CNFpred | | ------------------------------ASCCHAPGLECKVKEH---GIPAPQEQVTVACWTLTGCSALPGTSHVLGAYAVDNTC |
6 | 1vt4I3 | 0.14 | 0.13 | 4.33 | 0.70 | HHsearch-2 | | IPKTFDSDDLIPP--YLDQYFYSHIGHH-LKNIEHPEDFREQKIRHDSTAWNALNTLQQ---LKFYKPYICDNENLICSKYT-DLLR |
7 | 3gauA1 | 0.14 | 0.09 | 3.16 | 0.86 | Neff-PPAS | | --------------------------KEQVQSCGPPPELLNGNVKEKTKEEYGHSEVVEYYCNPRF--LMKGPNKIQCVDWTTLPVC |
8 | 3lb6C3 | 0.27 | 0.10 | 3.17 | 0.45 | HHsearch | | --------------------------------PLPPVYLTFTK--------------LKWSIPLGP-------IPARCFDYEIEIT- |
9 | 2yquA2 | 0.07 | 0.05 | 1.93 | 0.66 | SP3 | | ----LEYMDRILPTMDLEVAAERVFKKQGLTIRTG-VRVTAVVPEAKGARVEEGGEVLEADRAVG---------------------- |
10 | 4nuyA3 | 0.03 | 0.02 | 1.53 | 0.42 | PROSPECTOR2 | | YPDTYGKTSLRLPVANEKVDLQSQL------LFGSYENYTVKVTDSTLG--TTTDKTLATDKEETVDFFSPADKTKAVHTAKVIVGD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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