Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | ATENRCGWLQNPTPANWWLIDRDGTWTISAQGGYQARGIDNMPSLSDREYVTTNGSYGYGCACLRVVTDRKQMRIISIQSGRQLPLKTCRQDPKL |
1 | 4iglA | 0.08 | 0.08 | 3.27 | 0.80 | SPARKS-K | | PDRVFLADIDGSGTNDIIYAHSECEIYLNESGNRFSKPISLLPDFDNTCQLQAADIQGLGIASLVMTVPHMSPTHWRCDLALNKPWLLNVMNNNR |
2 | 3lifA1 | 0.14 | 0.12 | 3.95 | 0.38 | FFAS-3D | | ----------LPQLSDVAILDADGQLTYASVKPVPAL------DNSDRSYFRQSRTSGVWVFVVSRRLETTDGKFFGVVVA-TIESEYFSTFKTF |
3 | 3fahA | 0.16 | 0.15 | 4.88 | 0.39 | HHpred | | ---YGSGLDPDASEAWAELN-ADGTITVHTAWEDHGQGADIGSGCDVTGLGKPFVVYMYGVFMAEVTVDVATGTVDGMTLMSLCNQLATD----- |
4 | 3tc9A4 | 0.15 | 0.13 | 4.27 | 0.92 | MUSTER | | ETHPINGYFNSWNAGQVFRYDFTTQ-ETTPLFTIQDSGWEFHIQFHPSGIVVVNQH-----YILRSDYDWKTKRLTTPYIVCGQQGAK------- |
5 | 4up8A | 0.13 | 0.12 | 3.99 | 0.67 | CNFpred | | --VSVAGRVLSK-LMFIDLHDSQTKLQIMLNK-SAYENKEDFVSLT--KMIYR-----GDICGFTGHPTRTGELSLIPISGMILS--PCLHMLPS |
6 | 2nyaA | 0.15 | 0.15 | 4.94 | 0.39 | HHsearch-2 | | YHKAR-GL-RWPVVEGYKFPDEEYDLWLSTGVLWHTGSMRRFPELRRGDKVKVVSRRG--EVISIVETRNRPQGLVYMPFFDAALLTLDATDPLS |
7 | 3tc9A4 | 0.11 | 0.09 | 3.45 | 0.80 | Neff-PPAS | | -PINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ--HYILRSDYDWKTKRLTTPYIVCGQQGAK------- |
8 | 3r7tA2 | 0.11 | 0.09 | 3.40 | 0.62 | HHsearch | | GRKRRCGWFDAVAVRYTARLNGLDA--LSL-KLDVLDGFEKIKYIPSD--------LE-NVQPIYEE--DGWDKVFGIKDYDLLPENAKKYIAR- |
9 | 3tc9A4 | 0.15 | 0.13 | 4.27 | 1.04 | SP3 | | ETHPINGYFNSWNAGQVFRYDFTTQ-ETTPLFTIQDSGWEFHIQFHPSGIVVVNQH-----YILRSDYDWKTKRLTTPYIVCGQQGAK------- |
10 | 3it8D2 | 0.08 | 0.08 | 3.27 | 0.44 | PROSPECTOR2 | | IPKDTTPTGNELEDGNMTLEKGEYKYVNGRYYPEWGRKSNYEPGEPGFPWNIKKDKDAYSLTDLVRTTSKMSSQPVCVVFHDTLEAQVYTCSEGC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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