Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | DSDTGADALQGALGIRVKPFSAVNVIGAFERTFPLGNSNADGDWLVRLGYGSSIGTDLRVDVPSWWTSQLYAEGGRYLQDKRNYFNTEWQVGRSFRLDSISPRLVVFPHVVAAVDYDSKMRSEVDSLGRSSTSSGNAGGIGVGTGVRYWFREDTYKAPQSYVDFSVQYREKVFGDDRAEGVFARM |
1 | 2yfnA | 0.09 | 0.07 | 2.70 | 1.11 | CNFpred | | ---------QVEVHLLYGVLEENDVITRSVRIKNTGTGQITIEKAAAACLDFV-----------QGEFDVLRFYGKHA---MERNLERTPLTIAFGSRRGTSSHQYNPAVILAEKGT-------------TETAGSCYGMLFVYSGNFSCEAEKDQFNQTRLLLGLNFSYPLASGETFTVPEVIL |
2 | 2x27X | 0.13 | 0.12 | 4.34 | 1.13 | Neff-PPAS | | ---KAGDFIIRGGFATVDPDDSSSDIKLDGAKQRGTKATVDSDTQLGLTFTYMFADKWGVELVAATPFNHQVDVKGLLDGKLADIKQLPPTLLLQYYPMGGTNSAFQPYGGLGVNYTTDLASNRKAQGFSSMKLQDSWGLAGELGFDYMLNEHLFNMAVWYMDIDTKASINGPSALGVNKTKVDV |
3 | 4rlcA | 0.06 | 0.04 | 1.88 | 1.02 | SP3 | | --------------------------------------QGQNSVEIEAFGKRYFADLYGGSIGYFLTDDVELALSYGEYHDVV-HGNLTSLDAIYHFGTPGV--GLRPYVSAGLAH---QNITNINSDSQGRQQMTMANIGAGLKYYF--TEN--------FFAKASLDGQYGLEKGEWMAGLGV |
4 | 1w8nA1 | 0.08 | 0.08 | 3.17 | 0.75 | SPARKS-K | | AGQTTAPIKGFSDPSYLVDRETGTIFNFHVYSQRQTDPADPNVLHANVATSTDGGLTWITPDPGWRSRFAASGEGIQLRYGRLIQQYTIIQAVSVYSGVGMDENKTVELVLLNSRDSARSGYTDGGHSGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAA----SQTSRSQGTIRM |
5 | 4rl8A | 0.13 | 0.12 | 4.10 | 0.75 | FFAS-3D | | GDTSGVGDLTLTAPLKYRLNANDILGATVYLTAPTGNYNRDDKVDLQAAYVKHLGEKW----------AVDLVGDAIWYSDNDDFGARREQDVSYGA-QLMGRYIVDPGTSLAIGLGHTWGGENQIDGTAQDDRAETTNFRVTANKF----------FTAKDQLQMQLGRDLAVENGPKELNLRY |
6 | 3kvnX2 | 0.14 | 0.12 | 4.28 | 0.35 | HHpred | | DSDYRMNSYMASAFVQYQE-NRGYLDYDLKRKFALGGGGDTNLWAARLGYDIAQADPWHL-SPFVSADYARVEVDGYSEKDQKRSSKRLGAGLQGKYAF-G--SDTQLFAEYAHEREYEDDTPGNRFTLEGTPQDHLNRVSLGFSQKLA----------PELSLRGGYNWRKGEDDTQQSVSLAL |
7 | 2x27X | 0.12 | 0.11 | 4.01 | 0.89 | MUSTER | | -DIQGHKAGDFIIRGGFA-DDSSSDIKLDGAKQRGTKATVDSDTQLGLTFTYMFADKWGVE--ATPFNHQVDVKGLLDGKLADIKQLPPTLLLQYYPMGGTNSA-FQPYGGLGVNYTEDLASNRKAQGFSSMKLQDSWGLAGELGFDYMLNEH-V----WYMDIDTKASINGPSALGVNKTKVDV |
8 | 5nupA | 0.10 | 0.08 | 2.98 | 1.04 | CNFpred | | ----------FGTSLTYDIWDGISAGFAYSHSKRT-PALGRGDNAETYTGGL----KYDA--NNIYLASRYTQTYNATRAGFANKAQNFEVVAQYQFD--FGLRPSVAYLQSKGKDLERGYG------------DQDILKYVDVGATYYFN--------KNMSTYVDYKINLLGISTDDVVALGL |
9 | 4y25A | 0.13 | 0.12 | 4.12 | 0.75 | HHsearch-2 | | GGI----VRDWLAGVEWRSRN---IWLEAEYAERFNHE---HKPGARLSGWYDFNDNWRAMKNGV-TGNSAQAYVRWYQNERRKYGVSWRHEVQERIWS-SPYLIVDFLPSLYYEQNTEHDT----PYYNP-IKTFDIVPAFEASHLLWRSYENSWEQIFSAGVGAGYGQPYDGDEHNLYVEFDM |
10 | 3qq2A | 0.13 | 0.12 | 4.34 | 0.97 | Neff-PPAS | | SNAYDQTVSGLEIGLDRGWSARWYAGGLLGYTYADRTYPGDGGGKVKGLHVGGYAAYVGDGGYYLDTVLRLGRYDQQYNIRTSGAAWSLEGGRRFELP---NDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTATLGRLGLRFGRRIALAGGNIVQPYARLGWTQEFKSGRVELGAGVDAAL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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