Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | RIIKGDTNFSHLVVAHAAIDQHANAFGRTRQGWPCIYHLKYRDKLIAVEVVTRRQSYVATVMIGARNLTKLCG |
1 | 4r80A | 0.11 | 0.10 | 3.47 | 1.14 | SPARKS-K | | ----PSEEEEKRRAKQVAKEKILEQNPSQKQGNRVELEITENGTNITVEVEKQGNTFTVKRITETVGS----- |
2 | 1iv9A | 0.12 | 0.11 | 3.86 | 0.54 | FFAS-3D | | -----DIGPFTQNLGKFAVDEENKIGQYGRLTFNKVIRPCIKGYEYQLYVYASDKLFRADISTRGRKLLRF-- |
3 | 5cskA2 | 0.15 | 0.14 | 4.62 | 0.23 | HHpred | | ----EKPDPTLAVICGAATKAFLHKYGQVSKQTMFPVDFIHEGKRYKFTVAKSNDRYTLF-INGSKCLRQLS- |
4 | 4lziA2 | 0.08 | 0.08 | 3.22 | 0.95 | MUSTER | | INVPFPNNPEFQDLARFAVQDYNKKENAHLEVENLNVKEQLVAYYITLVAIDKKKIYEAKIWVNFKKVKLIGD |
5 | 2hqyA | 0.12 | 0.10 | 3.37 | 0.56 | CNFpred | | ---------NERRALIYALH-NFEALG------LTGGILHVNGKIVAFTFGMPHETFGVHVEKADTSIDGAYA |
6 | 3gr1A | 0.13 | 0.07 | 2.37 | 0.28 | HHsearch-2 | | FVIQGALDDVEILRARQFVDSYYRTWGGRY----VQFAIELK------------------------------- |
7 | 2mzvA2 | 0.15 | 0.14 | 4.62 | 0.90 | Neff-PPAS | | ------HDPVVQDAAHHAIKTIQERSNSLFPYVHANAEVVDTSAKFDMLLKVKREKYKVEVHKSGFNLKKVDL |
8 | 5j1fA2 | 0.17 | 0.15 | 4.93 | 0.44 | HHsearch | | QLIRSTLKPEEQRQALHSLELHYQAFLRDSQDAG-GFGPE-DRLMAEREYGSCSHHYQQL-------LQSLE- |
9 | 3k9mC | 0.14 | 0.12 | 4.23 | 0.69 | SP3 | | EAK--PATPEIQEIVDKVKPQLEEKTNETYGKLETNYYIKVRNKYMHLKVFKSLPGQ-----NEDLVLTGYVD |
10 | 5j6qA1 | 0.07 | 0.07 | 2.85 | 0.38 | PROSPECTOR2 | | VDKNAKDSAKLIEEVRKALEVKFEDTKAGANVNDRVYDIKVDNVSLKVTIQDKGHQVLGGKVVDYDIDSKVKN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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