>PF13267 (253 residues) MPSPFPGMNPYLEHPELWPEVHSRLIVAIADAIFPHLRPKYRVAIEKRVYQMTDGNSVLV GIPDVTIGRYIKATDKEPSNIAVASPPAKPITVNIPIPEEVRESYLEVREVGTGEVITVI ELLSPKNKRPGEGRKAYDTKRQQVFGSSTHLVEIDLLRGGEPMPILGNQIQSDYRILVSR SELRPRAELYPFNLPEQIPTFVLPLRKGDTEPLLDLQSVIQDLFDRAGFDLAIDYSREPV PPIGEDDIVWVSE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | MPSPFPGMNPYLEHPELWPEVHSRLIVAIADAIFPHLRPKYRVAIEKRVYQMTDGNSVLVGIPDVTIGRYIKATDKEPSNIAVASPPAKPITVNIPIPEEVRESYLEVREVGTGEVITVIELLSPKNKRPGEGRKAYDTKRQQVFGSSTHLVEIDLLRGGEPMPILGNQIQSDYRILVSRSELRPRAELYPFNLPEQIPTFVLPLRKGDTEPLLDLQSVIQDLFDRAGFDLAIDYSREPVPPIGEDDIVWVSE | |||||||||||||||||||
1 | 3ot2A | 0.14 | 0.09 | 3.22 | 0.87 | SPARKS-K | ETEPASEYIEGKIIQKPPQGKHSAIQSECVSVINSVVKPQRIARAFLELRCTFGD---HSTVPDISVFIW---------SRIPREENGE-------IANIF-----------LIAPDWTIEILSPDQS-----QTKVTKNILHCLKHGTQGWLIDP----------DEQ-----TVFVYRPQQETE------VFDEPDALVPVP--SFASELHLSIKDLFSWLL----------------------------- | |||||||||||||
2 | 3ot2A | 0.17 | 0.10 | 3.24 | 0.94 | FFAS-3D | ---------------------HSAIQSECVSVINSVVKPQRIARAFLELRCTFGD---HSTVPDISVFIWSRIPREENGEIANIFLIAPDW---------------------------TIEILSPDQS-----QTKVTKNILHCLKHGTQGWLIDPDEQ---------------TVFVYRPQQET----EVFDEPDALVPVP----SFASELHLSIKDLFSWL------------------------------ | |||||||||||||
3 | 3ot2A | 0.17 | 0.10 | 3.38 | 0.48 | HHpred | --------EGKIQKP--PQGKHSAIQSECVSVINSVVKPIARAFLELRCTFG---D--HSTVPDISVFIWSRIPREEN---G------------------EIANI------FLIAPDWTIEILSPDQS-----QTKVTKNILHCLKHGTQGWLIDPDEQ---------------TVFVYRPQQ--ETEVFD-EPDALV---PVPSF--ASELHLSIKDLFSWLL----------------------------- | |||||||||||||
4 | 3ot2A | 0.21 | 0.12 | 3.90 | 0.69 | MUSTER | KP---PQ------------GKHSAIQSECVSVINSVVKPQARAFLELRCTFG-----DHSTVPDISVFIWSRIPREENGEIANIFLIA-PD--------------------------WTIEILSPDQS-----QTKVTKNILHCLKHGTQGWLIDPDEQ---------------TVFVYRPQQ--ETEVFD-EPDA-----LVPVPSFASELHLSIKDLFSWLL----------------------------- | |||||||||||||
5 | 3ot2A | 0.16 | 0.09 | 3.01 | 0.97 | CNFpred | --------------------KHSAIQSECVSVINSVVKRIARAFLELRCTFGD-----HSTVPDISVFIWSRIPREENGEIANIFLI---------------------------APDWTIEILSPDQ-----SQTKVTKNILHCLKH-----------------------GTQMGWLIDPD--EQTVFVYRPQ--QETEVFLVPVPSFASELHLSIKDLFSWLL----------------------------- | |||||||||||||
6 | 6okhA | 0.16 | 0.10 | 3.28 | 0.80 | HHsearch-2 | L-P--EGTLELLDMVPAPIPEHQRVIRKFSNALSTFVEKLGEVFFPIDVYLDE----HNVVQPDLIFISKARNTII---------------------RE----KRI------EGAPDWIAEILSEGNAY-----HDLKTKKRLYEKHGVAYWIVDPMER---------------SVEIYQNGNSGTLASA---DSGT---VVSKML---DGFSLEIQTLFTKP------------------------------ | |||||||||||||
7 | 3ot2A | 0.19 | 0.11 | 3.68 | 0.75 | Neff-PPAS | -------KPP--------QGKHSAIQSECVSVINSVVKPQARAFLELRCTFGD-----HSTVPDISVFIWSRIPREENGEIANIFLIA---------------------------PDWTIEILSPDQS-----QTKVTKNILHCLKHGTQGWLIDPDEQ---------------TVFVYRPQQETEVFD--------EPDALVPVPSFASELHLSIKDLFSWLL----------------------------- | |||||||||||||
8 | 3ot2A | 0.18 | 0.11 | 3.74 | 0.98 | HHsearch | EFLKLPETEPAIQKPP--QGKHSAIQSECVSVINSVVKPIARAFLELRCTF--G---DHSTVPDISVFIWSRIPREEN---------------------GEIANI------FLIAPDWTIEILSPDQS-----QTKVTKNILHCLKHGTQGWLIDPDEQ---------------TVFVYRPQQ--ETEVFD-EPDALVP---VPS--FASELHLSIKDLFSWLL----------------------------- | |||||||||||||
9 | 3ot2A | 0.18 | 0.10 | 3.36 | 0.78 | SP3 | KPP---------------QGKHSAIQSECVSVINSVVKPQ------RIARAFLELRGDHSTVPDISVFIWSRIPREENGEIANIFLIAPD---------------------------WTIEILSPDQS-----QTKVTKNILHCLKHGTQGWLID--------PDEQ-------TVFVYRPQQETEVFD---EPDAL-----VPVPSFASELHLSIKDLFSWLL----------------------------- | |||||||||||||
10 | 4rpwA | 0.09 | 0.07 | 2.70 | 0.82 | PROSPECTOR2 | TPIHIPGLSEPLLGAPLGHFIEPSVREPLEADLRSARLKQ-----------------------------------------------LNPLKVVWRVDGVDRFFDGIAHRHQG-RLILELEPSSHREAVPFLSFFHAVRDGLSRLRDGFDRAIIYRFDAEWNDARADPYLGLHFLRIIPTIDYQPARVRALPGHGEPLDLSFSVLRSVS--------PIHLEYLHNMGVQASMSTQVSGTRYVPYEVRTACEK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |