Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MPSPFPGMNPYLEHPELWPEVHSRLIVAIADAIFPHLRPKYRVAIEKRVYQMTDGNSVLVGIPDVTIGRYIKATDKEPSNIAVASPPAKPITVNIPIPEEVRESYLEVREVGTGEVITVIELLSPKNKRPGEGRKAYDTKRQQVFGSSTHLVEIDLLRGGEPMPILGNQIQSDYRILVSRSELRPRAELYPFNLPEQIPTFVLPLRKGDTEPLLDLQSVIQDLFDRAGFDLAIDYSREPVPPIGEDDIVWVSE |
1 | 3ot2A | 0.14 | 0.09 | 3.22 | 0.87 | SPARKS-K | | ETEPASEYIEGKIIQKPPQGKHSAIQSECVSVINSVVKPQRIARAFLELRCTFGD---HSTVPDISVFIW---------SRIPREENGE-------IANIF-----------LIAPDWTIEILSPDQS-----QTKVTKNILHCLKHGTQGWLIDP----------DEQ-----TVFVYRPQQETE------VFDEPDALVPVP--SFASELHLSIKDLFSWLL----------------------------- |
2 | 3ot2A | 0.17 | 0.10 | 3.24 | 0.94 | FFAS-3D | | ---------------------HSAIQSECVSVINSVVKPQRIARAFLELRCTFGD---HSTVPDISVFIWSRIPREENGEIANIFLIAPDW---------------------------TIEILSPDQS-----QTKVTKNILHCLKHGTQGWLIDPDEQ---------------TVFVYRPQQET----EVFDEPDALVPVP----SFASELHLSIKDLFSWL------------------------------ |
3 | 3ot2A | 0.17 | 0.10 | 3.38 | 0.48 | HHpred | | --------EGKIQKP--PQGKHSAIQSECVSVINSVVKPIARAFLELRCTFG---D--HSTVPDISVFIWSRIPREEN---G------------------EIANI------FLIAPDWTIEILSPDQS-----QTKVTKNILHCLKHGTQGWLIDPDEQ---------------TVFVYRPQQ--ETEVFD-EPDALV---PVPSF--ASELHLSIKDLFSWLL----------------------------- |
4 | 3ot2A | 0.21 | 0.12 | 3.90 | 0.69 | MUSTER | | KP---PQ------------GKHSAIQSECVSVINSVVKPQARAFLELRCTFG-----DHSTVPDISVFIWSRIPREENGEIANIFLIA-PD--------------------------WTIEILSPDQS-----QTKVTKNILHCLKHGTQGWLIDPDEQ---------------TVFVYRPQQ--ETEVFD-EPDA-----LVPVPSFASELHLSIKDLFSWLL----------------------------- |
5 | 3ot2A | 0.16 | 0.09 | 3.01 | 0.97 | CNFpred | | --------------------KHSAIQSECVSVINSVVKRIARAFLELRCTFGD-----HSTVPDISVFIWSRIPREENGEIANIFLI---------------------------APDWTIEILSPDQ-----SQTKVTKNILHCLKH-----------------------GTQMGWLIDPD--EQTVFVYRPQ--QETEVFLVPVPSFASELHLSIKDLFSWLL----------------------------- |
6 | 6okhA | 0.16 | 0.10 | 3.28 | 0.80 | HHsearch-2 | | L-P--EGTLELLDMVPAPIPEHQRVIRKFSNALSTFVEKLGEVFFPIDVYLDE----HNVVQPDLIFISKARNTII---------------------RE----KRI------EGAPDWIAEILSEGNAY-----HDLKTKKRLYEKHGVAYWIVDPMER---------------SVEIYQNGNSGTLASA---DSGT---VVSKML---DGFSLEIQTLFTKP------------------------------ |
7 | 3ot2A | 0.19 | 0.11 | 3.68 | 0.75 | Neff-PPAS | | -------KPP--------QGKHSAIQSECVSVINSVVKPQARAFLELRCTFGD-----HSTVPDISVFIWSRIPREENGEIANIFLIA---------------------------PDWTIEILSPDQS-----QTKVTKNILHCLKHGTQGWLIDPDEQ---------------TVFVYRPQQETEVFD--------EPDALVPVPSFASELHLSIKDLFSWLL----------------------------- |
8 | 3ot2A | 0.18 | 0.11 | 3.74 | 0.98 | HHsearch | | EFLKLPETEPAIQKPP--QGKHSAIQSECVSVINSVVKPIARAFLELRCTF--G---DHSTVPDISVFIWSRIPREEN---------------------GEIANI------FLIAPDWTIEILSPDQS-----QTKVTKNILHCLKHGTQGWLIDPDEQ---------------TVFVYRPQQ--ETEVFD-EPDALVP---VPS--FASELHLSIKDLFSWLL----------------------------- |
9 | 3ot2A | 0.18 | 0.10 | 3.36 | 0.78 | SP3 | | KPP---------------QGKHSAIQSECVSVINSVVKPQ------RIARAFLELRGDHSTVPDISVFIWSRIPREENGEIANIFLIAPD---------------------------WTIEILSPDQS-----QTKVTKNILHCLKHGTQGWLID--------PDEQ-------TVFVYRPQQETEVFD---EPDAL-----VPVPSFASELHLSIKDLFSWLL----------------------------- |
10 | 4rpwA | 0.09 | 0.07 | 2.70 | 0.82 | PROSPECTOR2 | | TPIHIPGLSEPLLGAPLGHFIEPSVREPLEADLRSARLKQ-----------------------------------------------LNPLKVVWRVDGVDRFFDGIAHRHQG-RLILELEPSSHREAVPFLSFFHAVRDGLSRLRDGFDRAIIYRFDAEWNDARADPYLGLHFLRIIPTIDYQPARVRALPGHGEPLDLSFSVLRSVS--------PIHLEYLHNMGVQASMSTQVSGTRYVPYEVRTACEK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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