Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | PIEPPEGLRACCAFGYDLKTEVVGIPVPFYDIDNIVEAEKLGEHHYNDSALGASAALLGISNEKIGLLYTQKGGFIDISHVRDTADYTLYLFSQIYAHLGQERKLSLSNELAARKIHFFAFTPPVDPVERYTLSAYLAAKLAFQLAAWHEIAQWYGYQSVPGFPEGISAFSPEDLYSNLLGARLALTLILQGHASSVTQFTTSMAAILPSALHKLEPYSKSDTKKMFNQVDGLWWNSHERIPQKFLVLRRNYEIQDNRYPL |
1 | 5b4sA | 0.19 | 0.16 | 5.21 | 0.62 | SPARKS-K | | ----AAGVIPVGVYGAVFKLTVLSDAYPENGTTNYQEV---GPWRYCEVDYEAAQ---GISDYR-GDTFGPVG----VTTVGDFPDYFKKAFAPYVLG-KSNAT---NADLADDTALDPYPSKSRSDKNKRAALTKICGALQSAFDTYAHIDQDKGFTAFDRYNLVGLAFQVQVNTS--IGSISAFSSVKSAGLSAETCFATYLTDQYIRWLKKDPTGSVSVVNQVINASSGKCPTSGIKWSKNSWQ-------------- |
2 | 2wuiA | 0.12 | 0.08 | 2.72 | 0.66 | FFAS-3D | | --------------------------------DGILDARVFLEKGVGTTAMADLADAAGVSR---GAVY---------GHYKNKIEVCLAMCDRAFGQIEVP-----------------DENARVPALDILLRAGMGFLRQCCEPGSVQRVLEILYLKCERSDENEPLLRRRELLEKQGQRFGLQIRRAVERGELPARLDVELASIYLQSLWDGIRDDPWNRAERMFRAG------------------------------- |
3 | 2ns6A | 0.11 | 0.07 | 2.49 | 0.30 | HHpred | | ---------------YHLTAKTGS------G-GQ----SARAKADYIQR--------EGKYARDDEVLHAES------GHMPEFVERPADYWDAADLYERAN-------GRLFKEVEFALP-VELTLDQQKALASEFAQHLTGAEYTIHA----GGGECHLMISERIDGIERAQWFKR-YNGKTPGGAQKTEALKPLEQTREAWADHANRALERAGH-------------------------------------------- |
4 | 5cwpA | 0.11 | 0.10 | 3.43 | 0.57 | MUSTER | | -------------MSSDEEEARELIERAKEAAERAQEAERTGDPRVRELAKRLAQEAAEEVKRDPSSSDVNEA-----LKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVREL----------ARELVRLAVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLRSGDPEKREKARERV--------REAVERAEEVQRDPSGWLE---- |
5 | 2av8A | 0.10 | 0.05 | 1.86 | 0.72 | CNFpred | | --------------------------------------------------------------------------------IQKRAEGISSYYDELIEMT-GEGTHTVN----GKTVTVSL------RELKKKLYLCLMSVNALEARFYVSFACSFAFAERELMEGNAKRLIARDEALHLTGTQHMLNLLRSGADPEMAEIAEECKQECYDLFVQA----AQQEKDWADYL------------------------------- |
6 | 2pffB | 0.15 | 0.15 | 5.02 | 0.74 | HHsearch-2 | | PLTLSHSLEHVLSFFIASQLQFKILPEPFAADDEPTTPAELVGKFLGYVSSLVEPSKV---GQFDQVLNLCYLEGNDIHALDTTLVKTKELIKNITARIMRPFDKKSNSEGNQLVAIFGGQTDDYFEELRDLYHVLVGDLIKFSAETLSELIRTLDAENILEWLENPSNTPDKDYLLPLIGVIVVTAAIAET-DSWESFFVKAITVLFEDSLENNEGVPQEQVQDYVNSHPGKQVEISLVNGAKNLVRKAKAPSGLDRIPF |
7 | 5cwmA | 0.10 | 0.09 | 3.23 | 0.69 | Neff-PPAS | | ----------------DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGS-----EEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQKELRER----------------- |
8 | 2b8iA | 0.17 | 0.05 | 1.64 | 0.43 | HHsearch | | --------------------------------------------------------------------------------IRP--YMKALIYETLVNLA--------NQD----------------PEQH----ATIRQNL-------------YEQLDLPF--DK-----QLALYAGALGPASSGKL------ENHEAISNAVDSVVQL----LEI-------------------------------------------- |
9 | 1vr5A | 0.09 | 0.08 | 3.19 | 0.66 | SP3 | | NFFLPGGIV---TWYENAPYLPANTAGIYINVNKAINPEKIVTRAYENVTAANPAGILPLPGYKY----------------YPKEVVDKYGAKKILDELGNKDGFREDPNGKPFKLTIECPYGWTDWVSIQSIAEDLVKPKYPDYSKYADDLYGGKFDLILNNFTTGVSATIWSYFNGVFYPDAVESEYSYSGNFGKYA-NPEVETLLDELNRS---NDDAKIKEVVAKLSEILLKDLPFIPAWFQASEAVWNWPTEKNPY |
10 | 4dtdA | 0.13 | 0.13 | 4.50 | 0.89 | PROSPECTOR2 | | TKATPDFPTHFPKSSIGIENELAGLVVAPANSAQKFQGDALFLTKDNQGSYQRPPSLQDGKNYQNWQTHTVSYPCEDDKAAVETRKQALWLATHFTTHEDGRFVIEITNAKHVIAVAAKGFGTSATPELRLELAANVFAYLTSIYLKTAELAKKFGIDPSEQITPNANGLTDPKV-KNAWEILPRTKPSKIVEILSKS--DAKAVKHIKPQLQ--SRYSESLSKNVFQYFQDGGEVAGHGINNATVGDKHSRTVPNELPKT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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