>PF13265 (261 residues) PIEPPEGLRACCAFGYDLKTEVVGIPVPFYDIDNIVEAEKLGEHHYNDSALGASAALLGI SNEKIGLLYTQKGGFIDISHVRDTADYTLYLFSQIYAHLGQERKLSLSNELAARKIHFFA FTPPVDPVERYTLSAYLAAKLAFQLAAWHEIAQWYGYQSVPGFPEGISAFSPEDLYSNLL GARLALTLILQGHASSVTQFTTSMAAILPSALHKLEPYSKSDTKKMFNQVDGLWWNSHER IPQKFLVLRRNYEIQDNRYPL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | PIEPPEGLRACCAFGYDLKTEVVGIPVPFYDIDNIVEAEKLGEHHYNDSALGASAALLGISNEKIGLLYTQKGGFIDISHVRDTADYTLYLFSQIYAHLGQERKLSLSNELAARKIHFFAFTPPVDPVERYTLSAYLAAKLAFQLAAWHEIAQWYGYQSVPGFPEGISAFSPEDLYSNLLGARLALTLILQGHASSVTQFTTSMAAILPSALHKLEPYSKSDTKKMFNQVDGLWWNSHERIPQKFLVLRRNYEIQDNRYPL | |||||||||||||||||||
1 | 5b4sA | 0.19 | 0.16 | 5.21 | 0.62 | SPARKS-K | ----AAGVIPVGVYGAVFKLTVLSDAYPENGTTNYQEV---GPWRYCEVDYEAAQ---GISDYR-GDTFGPVG----VTTVGDFPDYFKKAFAPYVLG-KSNAT---NADLADDTALDPYPSKSRSDKNKRAALTKICGALQSAFDTYAHIDQDKGFTAFDRYNLVGLAFQVQVNTS--IGSISAFSSVKSAGLSAETCFATYLTDQYIRWLKKDPTGSVSVVNQVINASSGKCPTSGIKWSKNSWQ-------------- | |||||||||||||
2 | 2wuiA | 0.12 | 0.08 | 2.72 | 0.66 | FFAS-3D | --------------------------------DGILDARVFLEKGVGTTAMADLADAAGVSR---GAVY---------GHYKNKIEVCLAMCDRAFGQIEVP-----------------DENARVPALDILLRAGMGFLRQCCEPGSVQRVLEILYLKCERSDENEPLLRRRELLEKQGQRFGLQIRRAVERGELPARLDVELASIYLQSLWDGIRDDPWNRAERMFRAG------------------------------- | |||||||||||||
3 | 2ns6A | 0.11 | 0.07 | 2.49 | 0.30 | HHpred | ---------------YHLTAKTGS------G-GQ----SARAKADYIQR--------EGKYARDDEVLHAES------GHMPEFVERPADYWDAADLYERAN-------GRLFKEVEFALP-VELTLDQQKALASEFAQHLTGAEYTIHA----GGGECHLMISERIDGIERAQWFKR-YNGKTPGGAQKTEALKPLEQTREAWADHANRALERAGH-------------------------------------------- | |||||||||||||
4 | 5cwpA | 0.11 | 0.10 | 3.43 | 0.57 | MUSTER | -------------MSSDEEEARELIERAKEAAERAQEAERTGDPRVRELAKRLAQEAAEEVKRDPSSSDVNEA-----LKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVREL----------ARELVRLAVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLRSGDPEKREKARERV--------REAVERAEEVQRDPSGWLE---- | |||||||||||||
5 | 2av8A | 0.10 | 0.05 | 1.86 | 0.72 | CNFpred | --------------------------------------------------------------------------------IQKRAEGISSYYDELIEMT-GEGTHTVN----GKTVTVSL------RELKKKLYLCLMSVNALEARFYVSFACSFAFAERELMEGNAKRLIARDEALHLTGTQHMLNLLRSGADPEMAEIAEECKQECYDLFVQA----AQQEKDWADYL------------------------------- | |||||||||||||
6 | 2pffB | 0.15 | 0.15 | 5.02 | 0.74 | HHsearch-2 | PLTLSHSLEHVLSFFIASQLQFKILPEPFAADDEPTTPAELVGKFLGYVSSLVEPSKV---GQFDQVLNLCYLEGNDIHALDTTLVKTKELIKNITARIMRPFDKKSNSEGNQLVAIFGGQTDDYFEELRDLYHVLVGDLIKFSAETLSELIRTLDAENILEWLENPSNTPDKDYLLPLIGVIVVTAAIAET-DSWESFFVKAITVLFEDSLENNEGVPQEQVQDYVNSHPGKQVEISLVNGAKNLVRKAKAPSGLDRIPF | |||||||||||||
7 | 5cwmA | 0.10 | 0.09 | 3.23 | 0.69 | Neff-PPAS | ----------------DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGS-----EEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQKELRER----------------- | |||||||||||||
8 | 2b8iA | 0.17 | 0.05 | 1.64 | 0.43 | HHsearch | --------------------------------------------------------------------------------IRP--YMKALIYETLVNLA--------NQD----------------PEQH----ATIRQNL-------------YEQLDLPF--DK-----QLALYAGALGPASSGKL------ENHEAISNAVDSVVQL----LEI-------------------------------------------- | |||||||||||||
9 | 1vr5A | 0.09 | 0.08 | 3.19 | 0.66 | SP3 | NFFLPGGIV---TWYENAPYLPANTAGIYINVNKAINPEKIVTRAYENVTAANPAGILPLPGYKY----------------YPKEVVDKYGAKKILDELGNKDGFREDPNGKPFKLTIECPYGWTDWVSIQSIAEDLVKPKYPDYSKYADDLYGGKFDLILNNFTTGVSATIWSYFNGVFYPDAVESEYSYSGNFGKYA-NPEVETLLDELNRS---NDDAKIKEVVAKLSEILLKDLPFIPAWFQASEAVWNWPTEKNPY | |||||||||||||
10 | 4dtdA | 0.13 | 0.13 | 4.50 | 0.89 | PROSPECTOR2 | TKATPDFPTHFPKSSIGIENELAGLVVAPANSAQKFQGDALFLTKDNQGSYQRPPSLQDGKNYQNWQTHTVSYPCEDDKAAVETRKQALWLATHFTTHEDGRFVIEITNAKHVIAVAAKGFGTSATPELRLELAANVFAYLTSIYLKTAELAKKFGIDPSEQITPNANGLTDPKV-KNAWEILPRTKPSKIVEILSKS--DAKAVKHIKPQLQ--SRYSESLSKNVFQYFQDGGEVAGHGINNATVGDKHSRTVPNELPKT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |