>PF13258 (324 residues) QNANTAYFGDTDGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEEMASSAYKHKNNKVL YDLLNTRDMILNELHQHVFLKDDAITPCIFLGDHTGDRFSTIFGDKYILTLLNSMRNMEG NKDSRINKNVVVLAGNHEINFNGNYTARLANHKLSAGDTYNLIKTLDVCNYDSERQVLTS HHGIIRDEEKKCYCLGALQVPFNQMKNPTDPEELANIFNKKHKEHMDDPLFHLIRSNTLK PTPVYANYFDNTTDFRPARERIFICGETLKGEDPSKYIRQKYGHHGPGVDHNQQFDNGIM GLNSLKEARDKNNKIIYSSGLSCF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | QNANTAYFGDTDGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEEMASSAYKHKNNKVLYDLLNTRDMILNELHQHVFLKDDAITPCIFLGDHTGDRFSTIFGDKYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFNGNYTARLANHKLSAGDTYNLIKTLDVCNYDSERQVLTSHHGIIRDEEKKCYCLGALQVPFNQMKNPTDPEELANIFNKKHKEHMDDPLFHLIRSNTLKPTPVYANYFDNTTDFRPARERIFICGETLKGEDPSKYIRQKYGHHGPGVDHNQQFDNGIMGLNSLKEARDKNNKIIYSSGLSCF | |||||||||||||||||||
1 | 5n6xA | 0.18 | 0.15 | 4.84 | 1.19 | HHsearch-2 | --PGSISLGDLHGNAIKLIHFLFRHKIIKFKTEAYQQFVTIYEQYDDMVQELTDHQKANLQMAEKLPS-CIERFNKFMTIENDIKTLIRLLGDEVADRGSC---DYFTLRILDFLY--------QNQIAIKIILSNHGYEFIHAYEKLVVGQPPGDIQIKSFVKTLKIIDYSEDGITLYSHAPIRFDSI--RMAASQLGVTY----NDSTKEALAETLNAQLQIYMKNNMLHLLENNEI--NDPTNIYLVWNRNARPG-------------KYNGYFVTYVHGHDPFQSP-----LTYVYNLDTLCGKYSRV------------ | |||||||||||||
2 | 5nnyA | 0.20 | 0.15 | 4.85 | 1.59 | HHsearch | -PMTDISMGDLHANALLFLNILVRQGIIAISPENYAKFAEIYTLPELQADYW--GTEAPVFSAERLEE-IKKQYNALIAIKINTKKLIRLIGDELVDRGV---IDYFILKLLQALY--------DQGADFEILLSNHGIEFVEACELFKENGNKLVAQHHALQKHLKIISYSLNEIKVFSHAGIGLNHI--RGLARKFKVPY----SEESAVDLAKAINKKFAEKASSGEIHTLYGEHLSTEVVA--ATVWGREYRTS---------------KKFKITFIHGHD--------------------------------------- | |||||||||||||
3 | 5nnyA | 0.17 | 0.14 | 4.48 | 1.05 | SP3 | -PMTDISMGDLHANALLFLNILVRQGIIAISPENYAKFAEIYTLPELQADYWGTEAPVFSANKQERLEEIKKQYNALIIKIINTKKLIRLIGDELVDRGVI---DYFILKLLQAL------YDQGAD--FEILLSNHGIEFVEACELFKENGNKLVAKRLALQEAIASYSLDPDANKVFSHAGIGLNH------IRGLARKFKVPYSEESAVDLAKTIDAINKKFA--EKASSGEIHTLYTHDMMYRGYAGE-HLNSTDEVVAAEYGDLIRTSKKFKITFIHGHD--------------------------------------- | |||||||||||||
4 | 5nnyA | 0.15 | 0.12 | 4.14 | 0.74 | SPARKS-K | -PMTDISMGDLHANALLFLNILVRQGIIAISPENYAKFAEIYTL--PELQADYWGTEAPVFSAQERLEEIKKQYNALIIINTKKL--IRLIGDELVDRGVI---DYFILKLLQALYDQGAD--------FEILLSNHGIEFVEACELFKENGNKLVAKRLGNINSFHALQEAIAAGAILKIISYSLDPDANEIKVFSFKVPY-SEESAVDLAKTIDAINKKFAEKASSGEIHTLYTH------DMMYRGYAGEHLNSTDEVVAATVWGREYGDLIRKITFIHGHD--------------------------------------- | |||||||||||||
5 | 5nnyA | 0.16 | 0.13 | 4.20 | 0.80 | FFAS-3D | ---TDISMGDLHANALLFLNILVRQGIIAISPENYAKFAEIYTLPELAPVFSAENKQERLEEIKKQYNALIAQIK-----IINTKKLIRLIGDELVDRGVI---DYFILKLLQALYDQGAD--------FEILLSNHGIEFVEACELFKENGNKLVAKRKKHLKIISYSLDPDANEIVFSHAGI------GLNHIRGLARKFKVPYSEESAVDLAKTIDA-----INKKFAEKASSGEIHTLYTHDMMYRAGEHLNSTDEVVAREYGDLIRTSKKFKITFIHGHD--------------------------------------- | |||||||||||||
6 | 5n6xA | 0.18 | 0.15 | 4.93 | 0.73 | HHpred | --PGSISLGDLHGNAIKLIHFLFRHKIIKFKTEAYQQFVTIYEQYDDMVLQLTDHQKEFSQSLLQLKKPCIERFNKFMTQINDIKTLIRLLGDEVADRGSC---DYFTLRILDFLY--------QNQIAIKIILSNHGYEFIHAYEKLVVGQPIGDIQFWGLLPTLKIIDYSEDGITLYSHAPIRFDSI--RMAASQLGVTY----NDSTKEALAETLNAQLQIYMKNNMLHLLFENNINDPPLWNRWNESVENARPGK-------------YNGYFVTYVHGHDPFQSPL-----TYVYNLDTLCGKYSR------------- | |||||||||||||
7 | 5nnyA | 0.16 | 0.14 | 4.51 | 0.64 | MUSTER | -PMTDISMGDLHANALLFLNILVRQGIIAISPENYAKFAEIYTPELQADYWGTEAPVFSAENKQERLEEIKKQYNALIAIKINTKKLIRLIGDELVDRGVI---DYFILKLLQAL------YDQGAD--FEILLSNHGIEFVEACELFKENGNKLVAKRLGNIQHGN---------------------------FHALQEAIAA--GAISNEEVLNIYHQVYKKHL--KIISYSLDPDANEAGILARKFKV--PYSESAVDLAKTIDAI--GEIHTLYTHDMMYRGYAGEHLNSTDEVVAATG-REYGDLIR----TSKKFKIT | |||||||||||||
8 | 5nnyA | 0.18 | 0.12 | 3.82 | 0.76 | CNFpred | ----DISMGDLHANALLFLNILVRQGIIAISPENYAKFAEIYTLPELQADEAPVFSAENKQERLEEIKKQYNALIAQIKIIN--KKLIRLIGDELVDRGVI---DYFILKLLQALYDQ--------GADFEILLSNHGIEFVEAVAKRLGNI--QHGNSFHALQEAIAAGAISNEEVLLKIISYSLD-ANEIKVFSHAGIGLNHIYSEESAVDLAKTI-----DAINKKFAEKASSG--------------------------------------------------------------------------------------- | |||||||||||||
9 | 5nnyA | 0.20 | 0.15 | 4.93 | 1.18 | HHsearch-2 | -PMTDISMGDLHANALLFLNILVRQGIIAISPENYAKFAEIYTLPELQADYW--GTEAPVFSAERLEE-IKKQYNALIAQKINTKKLIRLIGDELVDRGVI---DYFILKLLQALY--------DQGADFEILLSNHGIEFVEACELFKENGNKLVAQHHALYKHLKIISYSLNEIKVFSHAGIGLNHI--RGLARKFKVPY----SEESAVDLAKAINKKFAEKASSGEIHTLRGEHLSTEVVA--ATVWGREYRT---------------SKKFKITFIHGHD--------------------------------------- | |||||||||||||
10 | 5nnyA | 0.18 | 0.15 | 4.71 | 0.79 | Neff-PPAS | -PMTDISMGDLHANALLFLNILVRQGIIAISPENYAKFAEIYTLPELQADYWGTESAENKQERLEEIKKQYNALIAQIKII-NTKKLIRLIGDELVDRGVI---DYFILKLLQALYDQ--------GADFEILLSNHGIEFVEACELFKENGNKLNIYHQVYKKHLKIISYSLNEIKVFSHAGIG---------LNHIRGLARKFESAVDLAKTIDAINKKFAEKASSGEIHTL------YTHDMMYRGYAGEHLNSTDEVVAATYGDLIRTSKKFKITFIHGHD--------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |