Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MMTYTEAAFIHETKVAATISTASIFPKTVDQLIEQAKQHKEVILHEYKEMKSKLNVRSTQEIEQALVIWKQGREKIAAERESLQKVYKSIEEPYNQVQEELKGNTTESNKQVFSYVNAGFHIVKE |
1 | 5vtlA2 | 0.12 | 0.10 | 3.39 | 0.84 | SPARKS-K | | ------------------------IPFGVKVLKALAAANVSDASKAREGCQDAVRFSSTPKVEEAVGRARAALKEAESAENAAKTALSDVEQYAANAPLLAAG-KMADLRAEYDQLEAAVRRASE |
2 | 1s35A2 | 0.09 | 0.06 | 2.45 | 0.94 | FFAS-3D | | ---------------------------GFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDKIKEKVQLIEDRH--------RKNNEKAQEASVLLRD |
3 | 5c0rA | 0.14 | 0.12 | 4.13 | 0.33 | HHpred | | -------GYHHQNEQGSGYAADQSTQNAINGITNKVNSVIEKMGGWYTSIIQQENVQQQNNLLRAIEAQQHLLQLTVWGIKQLQTYNAEVKNLYEKVKSQLKNNAKEIGNGCFEFYHK------- |
4 | 3na7A1 | 0.14 | 0.12 | 4.10 | 0.85 | MUSTER | | ----------LEPLIREK-------RKDLDKALNDKEAKNKAILNLEEEKLALKLQQTLQDTNAKIASIQKKMSEIKRELRSLNIEEDIAKERSNQANREIENLQNKRKSEKQEDLKKEMLELEK |
5 | 4tqlA | 0.13 | 0.10 | 3.61 | 0.57 | CNFpred | | -------------------------KQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGKMEELLKRAKEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEE |
6 | 5d3aA | 0.17 | 0.10 | 3.15 | 0.42 | HHsearch-2 | | ------------------------------------------------------GSMTISNMEADMNRLLKQREELTKRREKLSKRREKIVKENGEGDKNIN-EEMESLTANIDYINDSISDCQA |
7 | 3na7A1 | 0.13 | 0.11 | 3.91 | 0.82 | Neff-PPAS | | LDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALEL-------------- |
8 | 5d3aA | 0.17 | 0.10 | 3.14 | 0.47 | HHsearch | | ------------------------------------------------------GSMTISNMEADMNRLLKQREELTKRREKLSKRREKIVKENGEGVANIN-EEMESLTANIDYINDSISDCQ- |
9 | 4z34A2 | 0.04 | 0.03 | 1.62 | 0.62 | SP3 | | ----------------------------IFGYVADLEDNWETLNDNLKVIEK---ADNAAQVKDALTKMRAAALDAQKAMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQ |
10 | 4tqlA1 | 0.11 | 0.10 | 3.72 | 0.62 | PROSPECTOR2 | | Y-----------KQMVQELEKARLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEKLLEKLKQIMQEAKQKMEKLLKQLEEMKKMKEKMEKLLKEMKQRMEEVKKKMDDELLDLIKKAEENIKE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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